Gene Sala_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1933 
Symbol 
ID4082882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2038541 
End bp2039233 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content73% 
IMG OID638010310 
Producthypothetical protein 
Protein accessionYP_616978 
Protein GI103487417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCC GGGCGATGGC GGCGGTGACC GAACATCGGC TCCGCATCGA CCCGGTCGGC 
ACGCCGCGCG CGACCATCGT TTTCGTCCCG CCGCTGTTCG AGGAAGCGAA TCGCACGCGG
CGCACGCTGG TGCTCGCAAT GCGCGCGCTC GCCGCCGACG GGTTCGCGGC GCTGCTCCCC
GACCTGCCCG GCCAGAATGA AAGTCCTGCC CCGCTCGACC GGATCGATCT GGAGCAATGG
CAGCATGCGC TGGCGGCGAT CGTCGCCGCG ATCGACGGTC GCGTCATCGT CGCATCGGTT
CGCGGCGGCT GCCTCATCGA CCAGCGCGCG CAGGCCGATG CCTGGTGGCG ACTTGCCCCG
GTCGGCGGCG CGGCGCTGCT CCGCACCCTG CTCCGCGCGC GCGTCAGCGC CGACCGCGAG
GCCGGAATCG CCACGTCGCT CGAAAGCCTG CTCGCAACAG CCCGCGGCGG ACCGCTGCTG
CTCGCCGGCA ATGCCCTCTC ACCCGCGATG ATCGCCGGGC TTGGCGCGGC CGAGGCGCAG
CCGGTCGAAC CGTTGCGCAG CATCCCCCTC GGCGAAGGCG GGATCGCGGG CACCCCCCTC
TGGCTGCGCG CCGAGCCGGG CGAGGACGCA GCGATGGCGC GCGCGATCGC CGCGGACATC
GCCGCATGGA GCCGGACATG CGGCATCAGC TGA
 
Protein sequence
MTVRAMAAVT EHRLRIDPVG TPRATIVFVP PLFEEANRTR RTLVLAMRAL AADGFAALLP 
DLPGQNESPA PLDRIDLEQW QHALAAIVAA IDGRVIVASV RGGCLIDQRA QADAWWRLAP
VGGAALLRTL LRARVSADRE AGIATSLESL LATARGGPLL LAGNALSPAM IAGLGAAEAQ
PVEPLRSIPL GEGGIAGTPL WLRAEPGEDA AMARAIAADI AAWSRTCGIS