Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1933 |
Symbol | |
ID | 4082882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2038541 |
End bp | 2039233 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638010310 |
Product | hypothetical protein |
Protein accession | YP_616978 |
Protein GI | 103487417 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCC GGGCGATGGC GGCGGTGACC GAACATCGGC TCCGCATCGA CCCGGTCGGC ACGCCGCGCG CGACCATCGT TTTCGTCCCG CCGCTGTTCG AGGAAGCGAA TCGCACGCGG CGCACGCTGG TGCTCGCAAT GCGCGCGCTC GCCGCCGACG GGTTCGCGGC GCTGCTCCCC GACCTGCCCG GCCAGAATGA AAGTCCTGCC CCGCTCGACC GGATCGATCT GGAGCAATGG CAGCATGCGC TGGCGGCGAT CGTCGCCGCG ATCGACGGTC GCGTCATCGT CGCATCGGTT CGCGGCGGCT GCCTCATCGA CCAGCGCGCG CAGGCCGATG CCTGGTGGCG ACTTGCCCCG GTCGGCGGCG CGGCGCTGCT CCGCACCCTG CTCCGCGCGC GCGTCAGCGC CGACCGCGAG GCCGGAATCG CCACGTCGCT CGAAAGCCTG CTCGCAACAG CCCGCGGCGG ACCGCTGCTG CTCGCCGGCA ATGCCCTCTC ACCCGCGATG ATCGCCGGGC TTGGCGCGGC CGAGGCGCAG CCGGTCGAAC CGTTGCGCAG CATCCCCCTC GGCGAAGGCG GGATCGCGGG CACCCCCCTC TGGCTGCGCG CCGAGCCGGG CGAGGACGCA GCGATGGCGC GCGCGATCGC CGCGGACATC GCCGCATGGA GCCGGACATG CGGCATCAGC TGA
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Protein sequence | MTVRAMAAVT EHRLRIDPVG TPRATIVFVP PLFEEANRTR RTLVLAMRAL AADGFAALLP DLPGQNESPA PLDRIDLEQW QHALAAIVAA IDGRVIVASV RGGCLIDQRA QADAWWRLAP VGGAALLRTL LRARVSADRE AGIATSLESL LATARGGPLL LAGNALSPAM IAGLGAAEAQ PVEPLRSIPL GEGGIAGTPL WLRAEPGEDA AMARAIAADI AAWSRTCGIS
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