Gene Sala_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1893 
Symbol 
ID4082599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1992079 
End bp1993059 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content65% 
IMG OID638010269 
Productcysteine synthase A 
Protein accessionYP_616938 
Protein GI103487377 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.484332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0992226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTG CCAGAACCAG CCTGGACCTG ATCGGCAACA CGCCGCTCGT CCTGCTCAAG 
GGCCCCAGCG AAGCGACCGG CTGCGAAATC TGGGGCAAAT GCGAATATGC CAATCCCGGC
GGATCGGTAA AGGATCGCGC GGCGCTCTAT ATCGTCCGCG ATGCCGAAGC GACCGGCAGC
CTGCGCCCCG GCGGCACGAT CGTCGAGGGC ACGGCGGGCA ACACCGGTAT CGGGCTTGCG
CTCGTCGGCA ATGCACTTGG TTACAAGACG ATCATCGTCA TGCCCGACAA TCAGAGCGCC
GAGAAGATGG CGACGATCCG GGCCTTGGGT GCCGAGCTGG TGCTCGTGCC GCCCGCGCCC
TTTGCCAACC CCGGCCATTT CGTTCACACC TCGCGCCGCA TCGCCGAGGA AACCGACAAT
GCAATCTGGG CCAACCAGTT CGACAATATC GCCAACCGCA AGGCGCATAT CTCTGGCACC
GCCGAGGAAA TCTGGGCCCA GATGGGGGGG CGGATCGACG GCTTCACCTG CGCCGCGGGG
ACGGGCGGGA CGATCGCCGG GACGGGGCTG GGGCTGAAAG CCAGGGATCC CGCCATCACC
ATCGCGCTGA CCGACCCGCA CGGCGCGGGC CTTTACAATT ATTACCAGTG CGGCGAGCTG
AAAGCCGAGG GATCGAGCGT CGCCGAAGGC ATCGGGCAGA ATCGCATCAC CGCGAACCTC
GAAGGCGCGC CGATCGACAC GCAGTTCCGC ATTTCGGATG CCGAGGGTCT CGCGGTCGTG
CGCCGCCTGC TCGACGAGGA GGGGCTGTGC CTTGGTCTCT CGTCGGGGAT CAACGTCGCG
GGTGCGATGG CGCTGGCGCG GCAATTGGGG CCGGGCAAGC GCATCGCAAC CATTTTGTGC
GACAGCGGGT TTCGCTATCT CTCGACGCTT TACAACCCCG AGTGGCTGGC CGCCAGGGGA
CTGGGTGAGG CAAAGGGATG A
 
Protein sequence
MTIARTSLDL IGNTPLVLLK GPSEATGCEI WGKCEYANPG GSVKDRAALY IVRDAEATGS 
LRPGGTIVEG TAGNTGIGLA LVGNALGYKT IIVMPDNQSA EKMATIRALG AELVLVPPAP
FANPGHFVHT SRRIAEETDN AIWANQFDNI ANRKAHISGT AEEIWAQMGG RIDGFTCAAG
TGGTIAGTGL GLKARDPAIT IALTDPHGAG LYNYYQCGEL KAEGSSVAEG IGQNRITANL
EGAPIDTQFR ISDAEGLAVV RRLLDEEGLC LGLSSGINVA GAMALARQLG PGKRIATILC
DSGFRYLSTL YNPEWLAARG LGEAKG