| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1771 |
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| Symbol | |
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| ID | 4082083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1867820 |
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| End bp | 1870111 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638010146 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_616817 |
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| Protein GI | 103487256 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.718103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.459979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCATCC CGGTCAAGAG TCTGATCATC AGCTGGCGCA GCATCGGCTT GTCGCTGTTG
ATTGCCCTCG TAGTGGGCAT AACGGCGGCC GGCGAAGTGG CGGACCGCGT GCTCGACGCC
GTGGTGGGGC GTCTCGCGAT GCGTCCGGTA AGCGGCGAAG TGGTGATTGT AGCGCTGGAC
GAGCGCACAA TTACGCAATC GCCCAGCCGC AACTTCTCGA TGACCCAATA TGCAAATGTC
GTCGAAGCCG TGGACAAGGC TGGAGCGAGG CGCCTTTTCA TAGACTTCTA TTTCGACCGG
CGCGAGGCCG ACCATGATTT TCCACGTTTC GTCAGTGCGG TGAAGAATAT GGGCGACCGC
ATTGTCCTCG CGGTTTCGAC ACGTCAGGTT CCCGGTCGCG AAGATAAGGT CACAACATTC
CCCAGCAAGA AGTTCGGTCC CGATGTTCCC ATCGCAAGCA TCGCTGTAGA AAGCGAGTTT
TGGCAGGTAT GGCGCGTGCC AATTGCGTAT CGCGCCGAAG GAAAGTTGCT GCCGACCTTT
GCATCTATCA TGGCAGGGAA GAGCAGCGAT ACACCCAAAA GTTTTCGTCT GGACCTGAGC
TACGACACTC GCACGATTAC GGAGTATAGT GCCGCAGACT TGCTTTCAGG CAAGATCGGA
GCACGCGAAC TGGCTGGAAA GGATGTGATA TTCGCGCCAA CGGCACCGAG CTTTCAGGAT
TATTTCTATT TGCCTGGCCA TGATCGCGTC CCTGGAGGTT TCATTCACGT CATCGCGGCC
GAAACGTTGA AGCGGGGCGA CCCGATCGAT ATCGGTTGGC TACCACCGTT GCTCGTCGCA
ATCGCGCTGA CGGGGATAAC GCTTCTTCGG CGCTTCCAGC GTGCCGTTCT GCCCGCAATA
ATCGGCACGA TCGTTATCCT GATCGGTGGC AAGATCGTAC TTGGGACCAT GCTTGTGACG
TCATGGATCG GCGCGGCACT AGTCTACGTC GCGGCGATCG CGACCAACGT CTCGCGAACC
CGCAGGCGTA GTTCGGCGCA GCGCGAAAAT CCGGTCTCTG GGCTGCCCAA CTTCGAGGCG
CTCCGTTCGC TCCCGCCCTT CGGCAGCGCG ACGGTGATTG CCGCCAAGGT CGTCAATTTC
GAGGATCTCG CTGCCTTCAT TCCGGGCGAC GGCATTGGCA AGCTGGTCGA ACAGGTCACG
CGCCGCCTCC AGCTCGCGTC GCAGGGCACG ACATTGCACC ACGACCTCGA CGGCACTTTC
GCCTGGCTCG TGCCCTATTA TCAGCACAGC CAGATCGAGG GCCAGCTCGC CGGGCTCGCC
GCGCTGTTCA ACGCACCGCT GACGATCGGC GACCTGCGCG TCGACGTCGC GATCGCCTTC
GGGGTCAATG ACGAGTTCGA GGGGTCGAAC GCCCAGCGGC TCGCCGCCGC GCTCGTCGCC
GCCGAGCGCG CGATCCGCAC CCGCGCATTG TGGACCAAAT ATACGCCGCG GCAAAAGGAC
GGCGCCGGCT GGCAGCTGTC CTTCCACTCG CAGCTCGAGG ATGCGCTCAC CGGCGGCGAC
ATCTGGGTCG CCTTCCAGCC GCAATATGAG ATCGCCACCC GTCGTCTGGT CGGGGTCGAG
GCGCTTGCGC GCTGGACGCA CCCGACGCGC GGCCCCATTC CGCCCGATGA ATTCATCATT
CAGGCCGAAA AAAGCCAGGA CATCTATCGT CTGACGCTGT TCGTGATGGA TCAGGCGATC
CGCTCGGCGG CGGAGCTGCG CGGACGCGGT GTCCATATCA ACATGTCGGT CAACCTGTCG
GCGACCCTGC TCGATCACAG CGATCTGGTC GGGACGATCC GCGTCATGCT CACCGCGCAT
CATCTGCCGC CCGAAACCCT GACGATCGAG ATCACCGAAA CCGCGCAGAT CGAGAACAGC
CGGCAGGCGC GCCAGACGCT GGCACAGCTG CGCCGGACGG GCATCCGCCT GTCGATCGAC
GATTATGGCA CCGGCCAGTC GAACCTCGAA TATCTGACCG AGATCGAAGC CGACGAGATC
AAGATCGACA AGCGATTCGT TTCGACGATG CACGATTCGC AGCGCAACCG CGAAGTCGTC
AAATCGACGA TCGATCTGGC GCACCGGCTC GGTGCTGTCG CGGTTGCCGA AGGCATTGAA
GATGCAGAAA CAATGGCCCT GCTCGCCAGC CTCGGCTGCG ATGTCGGCCA AGGCTATCAT
CTTGGAAAAC CACAATTGTT TTCCGACCTC ATCGCCGCCC TGACGACCCC GCCCCACAGC
CGCTCCGCAT AA
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| Protein sequence | MPIPVKSLII SWRSIGLSLL IALVVGITAA GEVADRVLDA VVGRLAMRPV SGEVVIVALD
ERTITQSPSR NFSMTQYANV VEAVDKAGAR RLFIDFYFDR READHDFPRF VSAVKNMGDR
IVLAVSTRQV PGREDKVTTF PSKKFGPDVP IASIAVESEF WQVWRVPIAY RAEGKLLPTF
ASIMAGKSSD TPKSFRLDLS YDTRTITEYS AADLLSGKIG ARELAGKDVI FAPTAPSFQD
YFYLPGHDRV PGGFIHVIAA ETLKRGDPID IGWLPPLLVA IALTGITLLR RFQRAVLPAI
IGTIVILIGG KIVLGTMLVT SWIGAALVYV AAIATNVSRT RRRSSAQREN PVSGLPNFEA
LRSLPPFGSA TVIAAKVVNF EDLAAFIPGD GIGKLVEQVT RRLQLASQGT TLHHDLDGTF
AWLVPYYQHS QIEGQLAGLA ALFNAPLTIG DLRVDVAIAF GVNDEFEGSN AQRLAAALVA
AERAIRTRAL WTKYTPRQKD GAGWQLSFHS QLEDALTGGD IWVAFQPQYE IATRRLVGVE
ALARWTHPTR GPIPPDEFII QAEKSQDIYR LTLFVMDQAI RSAAELRGRG VHINMSVNLS
ATLLDHSDLV GTIRVMLTAH HLPPETLTIE ITETAQIENS RQARQTLAQL RRTGIRLSID
DYGTGQSNLE YLTEIEADEI KIDKRFVSTM HDSQRNREVV KSTIDLAHRL GAVAVAEGIE
DAETMALLAS LGCDVGQGYH LGKPQLFSDL IAALTTPPHS RSA
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