| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1620 |
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| Symbol | |
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| ID | 4081893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1700273 |
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| End bp | 1700926 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638009992 |
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| Product | Allergen V5/Tpx-1 related |
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| Protein accession | YP_616666 |
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| Protein GI | 103487105 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.315987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCT CGCGCCCGAT CGCCGCCGTC CTTCTCCTCC TCGCGCTGGG CGCGACCGCC
GCCCGCGCCG CCCCCGACCG GTTCGAGGCA GGCGTGTTCG CCGAACTCAA CCGCCTTCGC
AGCAATCCCG CCGCCTATGC CGATTTCCTG CGCGACTATC GCCCGCGATT CGAAGGGCGG
CGGCTGCGCG GCGCCGAAGA GGGCGAGATC GACATATTGA CGCGCGAAGG CGTCGTCGCG
GTCGATGAGG CGATCCGCGA ACTTCGCCGC GAAAAACCGC TGCCCGAACT CGCGTGGAGC
GACCTGCTCG CCCGCGCCGC CGCCGATCAT GTCGCGGTCC AGTCGCGATC GGGCGCGGTC
GGCCATTATA CCCGGGGGCA GGGACCGGGC GAACGGATGC GCGCCCGCGG CGGCGGCCCC
TATGTCAACG AAGTCATCAC CTATGGCCAC CACACGCCCG AAGGCGTCGT CGACCAGCTG
CTGATCGACG ATGGCGTCCC CGACCGCGGC CACCGGTTCA GCCTGCTTCG CCCGACACAC
CGCTTTGTCG GGGTCGCGTG CGGGCGGCAT CCGGTCCACC GGACCATGTG TGTCGCCTTG
ATGTCGCAGA CCGCTGACGG ATCGCCGCCG CCGCCGCCCA AACGGACGCC ATAG
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| Protein sequence | MKPSRPIAAV LLLLALGATA ARAAPDRFEA GVFAELNRLR SNPAAYADFL RDYRPRFEGR
RLRGAEEGEI DILTREGVVA VDEAIRELRR EKPLPELAWS DLLARAAADH VAVQSRSGAV
GHYTRGQGPG ERMRARGGGP YVNEVITYGH HTPEGVVDQL LIDDGVPDRG HRFSLLRPTH
RFVGVACGRH PVHRTMCVAL MSQTADGSPP PPPKRTP
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