| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1611 |
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| Symbol | |
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| ID | 4082766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1691545 |
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| End bp | 1693716 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009983 |
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| Product | glycine--tRNA ligase |
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| Protein accession | YP_616657 |
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| Protein GI | 103487096 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0785205 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATT TTCTTCTCGA ACTGCGCAGC GAGGAAATCC CCGCGCGGAT GCAGGCCGGC
GCGCGCGCCG AGCTAGAAAA GCTGTTCCGG ACGCAGATGA GCGCCGCGGG TATCGTGGTC
GGCGATCTGA CCATCTGGTC GACGCCGCGC CGCCTTGCCC TGATCGCTCG CGACCTGCCC
GACGCGACCG CAGCCGTCAG CGAGGAACTC AAAGGCCCGC GCACCAGCGC GCCGCCGCAG
GCCCTCGAAG GCTTCCTGCG CAAGACCGGG CTGACGCAGG ACCAGCTCGA AGACCGCGAC
GGCGTCTGGT TCGCCGTGAT CGACAAGCCG GGCCGCGCGA CCGCCGAGGT GCTGGCCGAG
GCGATCCCCG CGATCGTCCG CGCTTTTGCC TGGCCCAAGT CGATGCGCTG GGGCAGGGAC
AGTGCGAGCA GCGAAAGCCT GCGCTGGGTG CGCCCGCTGT CGGGCATCGT CGCGATCTTT
GGCGAAGCGC TGATTCCATG TGAAGTTGGG GGGATTTCCG CCGGTTTCGC AACGCGCGGC
CACCGTTTTC ACTGCCCGGG CGAGATCACG ATCGGCTCGG CATCGGACTA TGCGGAAAAG
CTGCGCGCAT GCCATGTCAT CGTCGACCAT GCGGAGCGGG CGCGTATCAT CCGCGACGGC
GCCGCCAAGG CCGCGGCCGA CGCCGGGCTG AGCCTCGTCG AGGACGAGGG GCTGGTGATC
GAGAATGCCG GCCTCACCGA ATGGCCGGTG CCGCTTCTGG GGCGCTTCGA CGAGGCGTTC
CTGGCGGTGC CGCCGGAGGT GATCCAGCTG ACCGCGCGGG TGAACCAGAA ATATTTTGTC
GTGAACGATG CGGATGGGAA GCTGGCGAAC GGTTTTGTCT GCACCGCGAA TATCGATGCG
GTCGACGGCG GCGCGGAGAT TGTGGCGGGG AACCAGAAGG TGCTGGCGGC GCGATTGTCG
GATGCGCGCT TCTTCTGGGA ACAGGATCGC AAGACGAAGC TGGCGGATCA CGCGAAGAAG
CTGGACCGGA TCACCTTTCA CGAAAAGCTG GGGACGGTCG CGGACAAGGT CGAGCGCGTT
GCGAAGCTGG CCGAATGGCT GGCGAACGAA GGCATCGTCC CGAATTGCGA CCCAGCGCTC
GCGCGGCAGG CGGCCGAGCT GGCGAAAGCC GACCTCGTCA CCGAAATGGT CGGCGAGTTC
CCCGAATTGC AGGGCCTGAT GGGCGGCTAT TACGCCCGCG CCGAAGGGCT TCCGCAAGCG
GTCGCCGACG CGATCCGCGA CCATTACAAG CCGGTCGGGC AGGGCGATGA CGTCCCGACC
GCGCCGGTGA CGGTGGCTGT GGCGTTGGCG GATAAGCTGG ATACGATTGC TGGCTTCTTC
ATGAAGAATA TGAAGCCGAC CGGGTCGAAA GACCCCTTTG CCTTGCGCCG CGCTGGATTG
GGTATCATTG CGCTAACGGT CAGAAGCTCG TTACGCGGAG ATATTGGGAC TTGGCTGGCT
GCAGCACGTC GATACTTTGT CGATCAGGAC ATCGTAGATG AGCGGGAATA TCCTGATGCC
TACGCAACGA AAGATGCTGC AATTTCCGCA GGCCTTGCCA CAGTTTTCAT GGATGAAGTT
CGCGACTTCA TCGCAGACCG CCTCAAAGTC CAGCAGCGCG AAGCCGGCGT CCGGCACGAC
CTGATCGACG CGGTTTTCGC GCTCGGCGGC GAGGATGATC TGGTTCGCTT GCTTGCGCGG
GTGAAGGCGT TGCAGGCGTT TATGGCGACC GAGGACGGCA CCAACCTGCT CGCGGGTTAC
AAGCGTGCAG CGAACATTTT GAAACAAGCC AGTGTTCCGG CGGAAGCCGG AACCCGGGGC
GGGGCAGCGC AGGTGTTGGA GGAAGGCACT CCTGGGCTCC GGCTTTCGCC GGAGTGCATG
ACGGTGCATG ACGCCGCGCT CCTCGCAGCC CTCGACACCG CCGAACCGGC TGCGCTCAAC
GCCGTCGCCG ACGAACGCTT CACCGACGCC ATGGCCGCCC TCGCCAGCCT TCGCGCGCCG
ATCGACGCCT TTTTCGAGGG CGTGATGGTC AACGACCCCG ACGAAGTGGT GCGCGCCTAT
CGGCTTGGAC TGCTCGCGCG CTTTACCGGC GCGGTGCATG GCGTTGCGGA TTTCTCGAAG
ATAGAGGGCT GA
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| Protein sequence | MTDFLLELRS EEIPARMQAG ARAELEKLFR TQMSAAGIVV GDLTIWSTPR RLALIARDLP
DATAAVSEEL KGPRTSAPPQ ALEGFLRKTG LTQDQLEDRD GVWFAVIDKP GRATAEVLAE
AIPAIVRAFA WPKSMRWGRD SASSESLRWV RPLSGIVAIF GEALIPCEVG GISAGFATRG
HRFHCPGEIT IGSASDYAEK LRACHVIVDH AERARIIRDG AAKAAADAGL SLVEDEGLVI
ENAGLTEWPV PLLGRFDEAF LAVPPEVIQL TARVNQKYFV VNDADGKLAN GFVCTANIDA
VDGGAEIVAG NQKVLAARLS DARFFWEQDR KTKLADHAKK LDRITFHEKL GTVADKVERV
AKLAEWLANE GIVPNCDPAL ARQAAELAKA DLVTEMVGEF PELQGLMGGY YARAEGLPQA
VADAIRDHYK PVGQGDDVPT APVTVAVALA DKLDTIAGFF MKNMKPTGSK DPFALRRAGL
GIIALTVRSS LRGDIGTWLA AARRYFVDQD IVDEREYPDA YATKDAAISA GLATVFMDEV
RDFIADRLKV QQREAGVRHD LIDAVFALGG EDDLVRLLAR VKALQAFMAT EDGTNLLAGY
KRAANILKQA SVPAEAGTRG GAAQVLEEGT PGLRLSPECM TVHDAALLAA LDTAEPAALN
AVADERFTDA MAALASLRAP IDAFFEGVMV NDPDEVVRAY RLGLLARFTG AVHGVADFSK
IEG
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