Gene Sala_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1558 
Symbol 
ID4082728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1623066 
End bp1623371 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content65% 
IMG OID638009927 
Producthypothetical protein 
Protein accessionYP_616604 
Protein GI103487043 
COG category[S] Function unknown 
COG ID[COG5572] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0381215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATT CGCTGAAACT GTCGCTCGCC GCCTCGGCGG TGCTCGCGCT CGCCGCGGGC 
AACGCCTTCA CCGGCACCGC CATCGCTGCC GAAGGCGCCA AGGGCGCCAA GGAAAAATGC
TATGGCGTCG CGCTCAAGGG CAAGAATGAC TGCGCCGCCG GTCCGGGCAC GAGTTGCGCC
GGCACGTCGA CCGTCGATTA TCAGGGCAAC GCCTGGAAAT ATGTCGCCAA GGGCACATGC
GAAAAGATGG GCGGAACGCT GACCGCGCAC AAGGGCAACG CCAAGCCGGT GCCGAAGAAG
GGCTGA
 
Protein sequence
MTNSLKLSLA ASAVLALAAG NAFTGTAIAA EGAKGAKEKC YGVALKGKND CAAGPGTSCA 
GTSTVDYQGN AWKYVAKGTC EKMGGTLTAH KGNAKPVPKK G