Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1558 |
Symbol | |
ID | 4082728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1623066 |
End bp | 1623371 |
Gene Length | 306 bp |
Protein Length | 101 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009927 |
Product | hypothetical protein |
Protein accession | YP_616604 |
Protein GI | 103487043 |
COG category | [S] Function unknown |
COG ID | [COG5572] Predicted integral membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0381215 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATT CGCTGAAACT GTCGCTCGCC GCCTCGGCGG TGCTCGCGCT CGCCGCGGGC AACGCCTTCA CCGGCACCGC CATCGCTGCC GAAGGCGCCA AGGGCGCCAA GGAAAAATGC TATGGCGTCG CGCTCAAGGG CAAGAATGAC TGCGCCGCCG GTCCGGGCAC GAGTTGCGCC GGCACGTCGA CCGTCGATTA TCAGGGCAAC GCCTGGAAAT ATGTCGCCAA GGGCACATGC GAAAAGATGG GCGGAACGCT GACCGCGCAC AAGGGCAACG CCAAGCCGGT GCCGAAGAAG GGCTGA
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Protein sequence | MTNSLKLSLA ASAVLALAAG NAFTGTAIAA EGAKGAKEKC YGVALKGKND CAAGPGTSCA GTSTVDYQGN AWKYVAKGTC EKMGGTLTAH KGNAKPVPKK G
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