Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1522 |
Symbol | |
ID | 4080036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1587606 |
End bp | 1588262 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009890 |
Product | 2OG-Fe(II) oxygenase |
Protein accession | YP_616568 |
Protein GI | 103487007 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.716956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.97292 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCTT CGGGCGCCGA CCGCACCGCA GCGCGGCTTG CCGCCGTCCC CGGCATCCGC CGCGCGCCGA CATCCAGGCT CGAACAGTTC ATGCTGCCGC GCTTCCTCGA CGCCGAAACC TGCGCCGCGC TGATCGACCT GATCGACAGC GACGCGCGCC CGTCAACGAT CGCCGATGCC AATGGCGACG CGGCGTTCCG CACCAGTTCG ACCTGCGATC TCGACCACCG CCTTCCGATC GTGATCGCGG TCAACAACAA GCTTCACGAC CTCACCGGCA TTCCGCTCGC ATATGGCGAG CCGTTGCAGG GCCAGCGTTA CGACATCGGC GAGGAGTTCA AGGCGCACAC CGACTATTTC GATCCGCACG GCGCCGACTG GGACACCTAT TGCGCGGTGC CGGGGCAGCG GAGCTGGACC TTGATGATCT ACCTCAACCA ACCCGCCGCG GGCGGCGCGA CGCGCTTCCT TGCGACCGGC AAGATGCACC AGCCCGAAGT CGGAAAGCTG CTCGCGTGGA ACAATGTCCG ACCCGATGGC ACCATCAATC CCGACACGCT CCACCACGGG ATGAAGGTGC GCAAGGGGCG CAAATATATC ATCACCAAAT GGTTCCGCGA ACGGCCCTGG CCGTGGGCAG CGGGGGAGCT GGAATAA
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Protein sequence | MASSGADRTA ARLAAVPGIR RAPTSRLEQF MLPRFLDAET CAALIDLIDS DARPSTIADA NGDAAFRTSS TCDLDHRLPI VIAVNNKLHD LTGIPLAYGE PLQGQRYDIG EEFKAHTDYF DPHGADWDTY CAVPGQRSWT LMIYLNQPAA GGATRFLATG KMHQPEVGKL LAWNNVRPDG TINPDTLHHG MKVRKGRKYI ITKWFRERPW PWAAGELE
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