Gene Sala_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1501 
Symbol 
ID4081179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1564893 
End bp1565315 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content62% 
IMG OID638009868 
Producthypothetical protein 
Protein accessionYP_616547 
Protein GI103486986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.522888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.351834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCTT CGTCCCGCAA TCCCGACGCA ATCTTCGACG CGCTGATTCC CGACCGCACC 
GACCCCGCTG CGCTGCGCAA GCGCGTCGAG ATGCTCGAAA TCCTGCTCGA ACGCGGCTTT
GTCATTCCAG GCATCAATCG CGCCGTCGGC CTCGATGCGA TCGTCGGGCT GGTCCCCGTC
GTCGGCGACG TCATCGCCGC GACGATGGGC GCCTATCTGA TCTGGGAAGC GCGCAACCTC
GGTATGCCGA AGTGGAAGAT CTGGCGCATG GTCGGCAATC TGGGAATCGA CACGGCGCTC
GGCGCTGTCC CGCTGGTCGG CGATGCCTTC GACTTTTTCT TCCGCTCGAA CACGCGGAAC
CTCAGGATCA TCAAGAAACA TCTCGACAAG CATCATCCCG GAACGCTCGT CATCGAGCAG
TAG
 
Protein sequence
MAPSSRNPDA IFDALIPDRT DPAALRKRVE MLEILLERGF VIPGINRAVG LDAIVGLVPV 
VGDVIAATMG AYLIWEARNL GMPKWKIWRM VGNLGIDTAL GAVPLVGDAF DFFFRSNTRN
LRIIKKHLDK HHPGTLVIEQ