Gene Sala_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1454 
Symbol 
ID4081265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1504478 
End bp1505446 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content67% 
IMG OID638009819 
Producthypothetical protein 
Protein accessionYP_616500 
Protein GI103486939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATATA AGGTACATAC GGCTTCGGGG CTTCGATCCA CTGGGCCCCT GAAGGCCATG 
TGGGGCGCGG TGCTGCTCGC GCTGGCAGGG TGCGCGCCCG GCCACGCGGT CGCCAGCACC
GTCCCGCATG GTGACGCCGC CGCGGGGCAG ACCGACCCCA GGGCTGCGCC GCGAACGATC
CTGTTCATCG GCAACAGCTT TACGCAGGGC GCGCATTCGG CGGCGCGCAA CTGGCGTGCG
GGATCAGTCA CCGACCTCAA TAACGCCGGC TATGGCGGCG TACCGGCGCT GTTCAAGCTG
TTCACCGAGC AGGCGGGGCT GGACTATCAT GTCAGCCTCG AAACGCAGGG CGGCAAGTCG
CTGGGCTTTC ATTATGACGA GCGGCGCCAG CGGTTCGACC GCGCGTGGGA CGTTGTCGTG
CTGCAGGAGT TCAGCACGCT CGACCGCGAC CGGCCCGGTG ATCCCGGCAA CTACATGCGC
GACGTCGACC GGCTTGCCAG GCTGTTCAAG GCGCGTAATC CCGCGGTCGA CATCCGCCTG
ATGGCGAGCT GGACGCGCGC CGACCAGACC TACAAGCCCA CGGGGCATTG GTATGGTCGG
CCAGTGACCG CGATGGCGGA GGATCTGCGC GCCGCGGCCG ACAAGGTGCG CGCCGCCAAT
CCCGCGGTCA CCGGCATCCT GCCGGTGGGG CAGGCGTGGA ACCGCGCGAT GACAGAGGGG
ATCGCCGATG CCAATCCCTA TGACGGCATC GGCTATGGCC AGCTCGATCT GTGGGCCTAT
GACCATTATC ACGCCAGCGT CGCGGGCTAT TATCTTTCGG CGCTGGTGAC CTTCGGCGCG
GTTACCGGCG TCGATCCGAC GGCGCTGGGA CCGGATGAGA AGGGTGCGGA CGAACTGGGC
CTTTCCAACG CTCAGGCCAC GGCGTTACAG CGTGTCGCGC GCGATACGCT GCGAAGCGCG
GGCAGCTGA
 
Protein sequence
MRYKVHTASG LRSTGPLKAM WGAVLLALAG CAPGHAVAST VPHGDAAAGQ TDPRAAPRTI 
LFIGNSFTQG AHSAARNWRA GSVTDLNNAG YGGVPALFKL FTEQAGLDYH VSLETQGGKS
LGFHYDERRQ RFDRAWDVVV LQEFSTLDRD RPGDPGNYMR DVDRLARLFK ARNPAVDIRL
MASWTRADQT YKPTGHWYGR PVTAMAEDLR AAADKVRAAN PAVTGILPVG QAWNRAMTEG
IADANPYDGI GYGQLDLWAY DHYHASVAGY YLSALVTFGA VTGVDPTALG PDEKGADELG
LSNAQATALQ RVARDTLRSA GS