Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1440 |
Symbol | |
ID | 4081522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1488552 |
End bp | 1489781 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009805 |
Product | hypothetical protein |
Protein accession | YP_616486 |
Protein GI | 103486925 |
COG category | [S] Function unknown |
COG ID | [COG2989] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0895828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACG ATGCGCCGGT CGTCGCGGCG CAGTTCGAAA TGCCGGGCTG GTCGGAAGAA AATGCGACTG CGCTTCTTGG CTTTATCGAA AAGGTCGGCG ACGAGGGCCT GTTCGCGCGG GATTACAACC CCGATGCGCT CGCTGCGGCG ATCCTGGCGA ACGATCAGGC CAAGCTCGAC ACGCTGGCGA CCGACACCTT CCTGCTGCTC GCGACGCACC TGCGCGACGG GCGCACACCC AACGCCGCAC GCAAACAATG GTTCATGACT GACAGCGATG GCGAGAACGA ACCCCTGCTC GCCCTGCTGA CCGCCGCGCT CGGCGCGGGC ACGGTCGCCG AAACGCTGGC GAGCCTGAAC CCGGTCCATC CCGATTTCGC GGTGCTCAGG GCGGCGCTCA AACGCGCGAA GACGGCGGCC GACGCACAGG CGATCCGCGT CAACATGGAA CGCTGGCGCT GGATGCCGCG CGACCTTGGC GAACGCTATG TCGTCAGCAA TGTTCCCGAA TATCTGACGC GTGTCGTCCA TGGCGGCACC GTCATCGCAA CGCACAAGGC GGTGGTCGGC AAGAAATCGA CTCCGACGCC GCAGCTCAAT CCGATGGCAA CCGGGATCAT CGTCAACCCG AACTGGACGC TGCCGCGCAG CATCATCAAC GAAGGCATCG GCGCGACGAT CGCGCGTAAT CCGGCCGCTG CGCGCGCGCA GGGCTATACC TGGACGGGCA GTGGCAAGAC CTTGTCGGTG GTACAGAAGC CCGGCCCGAA CAATGCGCTG GGCGTCATGA AGATGGAGAT GCTGAACGAA CACGCCATCT ATCTGCACGA TACGCCGTCG AAGAATGCGT TCAACGCCGC GGCGCGCGCC TTCAGCCACG GCTGCATCCG CACCGAACGC GCGCTGCACT TCTCGGGTCT GATGGCGGTG ATGTTCGCCG GGCGTAGCCC CGAGGAGTTC GGCGAAGCGA TCGCCAGCGG CAAGACGACG CGATTCGGCT TCGATCAGCC CTTCCCCGTC TATGTCGCCT ACTGGACCGT CGTGCCCGAC GGCAAGGGTG GCGTGAAAAA GCTCGCCGAC CTTTACGAGC GCGATGCGCC CGTCGTCGCA AGTTTTGCCA GGCCTGGTCG CCCGGCCGCA ACAATCATCG CGCCGGTGCC GCCGCCGGTC GTCCCGACGG TCGATACGGC GGCGCGCGTC ACGACGCCGG GGACCAGCGG GATTTATTGA
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Protein sequence | MTDDAPVVAA QFEMPGWSEE NATALLGFIE KVGDEGLFAR DYNPDALAAA ILANDQAKLD TLATDTFLLL ATHLRDGRTP NAARKQWFMT DSDGENEPLL ALLTAALGAG TVAETLASLN PVHPDFAVLR AALKRAKTAA DAQAIRVNME RWRWMPRDLG ERYVVSNVPE YLTRVVHGGT VIATHKAVVG KKSTPTPQLN PMATGIIVNP NWTLPRSIIN EGIGATIARN PAAARAQGYT WTGSGKTLSV VQKPGPNNAL GVMKMEMLNE HAIYLHDTPS KNAFNAAARA FSHGCIRTER ALHFSGLMAV MFAGRSPEEF GEAIASGKTT RFGFDQPFPV YVAYWTVVPD GKGGVKKLAD LYERDAPVVA SFARPGRPAA TIIAPVPPPV VPTVDTAARV TTPGTSGIY
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