| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1421 |
|---|
| Symbol | |
|---|
| ID | 4081738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 1474080 |
|---|
| End bp | 1474517 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638009787 |
|---|
| Product | membrane-associated proteins in eicosanoid and glutathione metabolism (MAPEG) |
|---|
| Protein accession | YP_616468 |
|---|
| Protein GI | 103486907 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3788] Uncharacterized relative of glutathione S-transferase, MAPEG superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.573394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.982205 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAATCC TGCCGATCAG CCTGACGATT GCCGCGGGGG CGGCGCTGCT CAACCTGTGG
CTCTCGATCC GCGTCGGCCG CGTGCGGACC AGGGAGAAGG TCTTTATCGG CGACGGCGGC
AATGAGCCGC TGACGCGGCG GATGCGCGCA CAGGCCAATT TTGTCGAAAA CACGGCCTTT
GTGCTGATCC TCCTCGCGCT CGTCGAACTC GGATTGGGAT CGTCGATGTG GCTGTGGGGC
GTCGGTGCTC TCTACCTCGT CGGGCGCGTC CTTCATGCGA TCGGCATGGA CGGGATGATG
TGGGGCCGCA TGGTCGGCAC GATTATCACC ATGCTGACCC AGCTCGGCCT CGCCATCGGC
GCGCTCGCGA TCGTCTATCT GACGCCGACA AACATCACAA CGACCGAAAT CGAGGAAGTG
GCGGTCGCGC CGCGCTGA
|
|---|
| Protein sequence | MIILPISLTI AAGAALLNLW LSIRVGRVRT REKVFIGDGG NEPLTRRMRA QANFVENTAF
VLILLALVEL GLGSSMWLWG VGALYLVGRV LHAIGMDGMM WGRMVGTIIT MLTQLGLAIG
ALAIVYLTPT NITTTEIEEV AVAPR
|
|---|
| |