| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1387 |
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| Symbol | |
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| ID | 4081859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1442455 |
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| End bp | 1443594 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009753 |
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| Product | cupin 2, barrel |
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| Protein accession | YP_616434 |
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| Protein GI | 103486873 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3435] Gentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR02272] gentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.125216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGCC CTTCGACGAT CATCGATCCG CGCGACGACG TGCTCGGCCG GTCGCGCGTC
ACCGACACGC CCGAGCTGGA GGCGTTTTAC GAAGAGCTCG CGGCGCGCAA CGCCGGCGCC
TTCTGGAAGC GCGCCAATGC GATCGAACCA TGGGAGCCCG CCACGCGCTA TCGCCCGACG
CTCTGGCGTT ATGCCGAGAT GCGCGCCATG TGCCTGCGCG CGCTTGATCT CGTAAGGCCC
GACGAAGCGG GGCGGCGCGT CGTCACCCTG CTCAACGACA GCGATGCGGG GCGCGAGAAT
GTCGCGGTGT GCGGCTGGCT GTTCAGCGGA ATGCAGGCGA TGCGCCCCGG CGAGATCACC
CCCGCGCACA AACACACGGC GTCGGCGCAC CGTTTCATCA TGGAGGGGAA GGGCGCCTAT
ACCGTTGTCG ACGGGCATCA CATCACGCTG GGTGCCAACG ACTATGTGCT GACCCCGAAC
GGCTGCTGGC ACGACCATGG CGTCGCCGCC GACGGCGAAG TGTCGATCTG GCAGGACGGG
CTCGACATCC CGCTGATGAA CAGCCTCGAA ACCAATTTCT ATGCCGTCTA CGACCAGCCC
GCGCAGACGG CAGCCTATCC GGCGGACGAT CTGCCGCTGA CCTATGGCGG CGCGGCGCTC
CGCCCCGAAG GCGTCGCGGC CTGGGAAAAA CCCTATTCGC CGGTGATGGT CTATCGCTGG
GAGGCCGTGC GCGATGCCTT GTTGAACCTT GCGAAAGTGT CGGTCGGGTC GCCCTTCGAC
GGTCATATGA TGCGCTATGC CAACCCGCTG ACCGGCGGCT GGGCGCTCCA GACGATGGGC
GCGCATATGC GGATGCTGCC CGGCGGTTTT CGCGGCAAGG CGCACCGCCA CACGGGCAAT
GTCGTCTATA ATGTCGCGCG CGGCCGCGGC TGTTCGATCA TCGGCGGTCA GCGGTACGAC
TGGCAGACAC ACGATATTTT CTGTGTGCCC GCGTGGACCT GGCACGAGCA TGTCAATCTC
GATGCCGCGG AAGAAGCCTT CCTCTTCTCG TTCAACGACT TCCCCGTGAT GGAGGCGCTC
GGCGTCCGGA TCGAGGAACC TTTCCCGAAA AACGACGGAC ATCAAATATG CGCTTCGTAA
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| Protein sequence | MTGPSTIIDP RDDVLGRSRV TDTPELEAFY EELAARNAGA FWKRANAIEP WEPATRYRPT
LWRYAEMRAM CLRALDLVRP DEAGRRVVTL LNDSDAGREN VAVCGWLFSG MQAMRPGEIT
PAHKHTASAH RFIMEGKGAY TVVDGHHITL GANDYVLTPN GCWHDHGVAA DGEVSIWQDG
LDIPLMNSLE TNFYAVYDQP AQTAAYPADD LPLTYGGAAL RPEGVAAWEK PYSPVMVYRW
EAVRDALLNL AKVSVGSPFD GHMMRYANPL TGGWALQTMG AHMRMLPGGF RGKAHRHTGN
VVYNVARGRG CSIIGGQRYD WQTHDIFCVP AWTWHEHVNL DAAEEAFLFS FNDFPVMEAL
GVRIEEPFPK NDGHQICAS
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