Gene Sala_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1372 
Symbol 
ID4081937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1427553 
End bp1428569 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content69% 
IMG OID638009738 
Producthypothetical protein 
Protein accessionYP_616419 
Protein GI103486858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.119661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG TGCGCACGCT CGCCGACCTG CTCGCCGGAC GGCGCGAGGC GGCAACCCTC 
GCCCCGCGCG ACTGGGACAG GGTGATCACC GTCGCGCGCG CCGAGGCGAT GCTGGGGACG
CTGGCACACC GGCTGGACGA GACCCCGCTG CCCTCCACGG TTGCTGCGCT GTTTGCGGAT
CAGCGCGCCG CGGCAAAGGT CGCGACCGCG CAGGCGCTGT GGGAAGCGGA GATGGCGCGC
CGCGCGCTCG CCCCCGAAGG GATCGAGTTC GTGTTGCTCA AGGGCGCCGC CTATGCCGCC
GCGGGCCTTG CGTGCAGCGT CGGGCGCCAG ATCGGCGACC TCGACATACT GGTGCTCGCC
CCCGACATCC GCCGCGCCGA AAATGCGCTG CTGAACGCGG GGTGGGAATG GGTGAAGTCT
GATCCCTATG ACGATCATTA TTACCGCGCG CACATGCACG AGTTGCCGCC GATGATTCAC
AAGGCGCGCG ACCGGATGAT CGACGTGCAT CACACCATCC TGCCGCGCAC GCACCGAATC
ACGCCCGACG CGCTGGCGCT GGTCAGCGAT GCGGTGACGA TTGCGGGCGG CCATGCGGTG
CTCTGCCCCA CGGACATGGT GGTGCATTGC GCGGCGCATA TGCTCGCCGA CGGCGATTTG
CAGGGCGGGC TGCGCAATCT GTGGGATTTC CACTGCCTGA CGCGCGATTT CGCCGCCGCG
GACGCGGGAT TCTGGGGCAA GCTCGACGCG CGGGCGGAAC TGCACGGGCT GCGCGCCGCG
GTGCGCCGGG CGGCGCGGCT GGCGCGCGAT CTTTACGGAA GTGTGCTGCC GTCGGGCTGG
GACGGGCAGA ATGGCAGCGA CCTCTGGTAT CGCCGCCGCT TGCTCGCGCG GGACGATTGG
GGACGGGTGA CCAATCCATT GCTCGAACAG GCCTTTTACA TCCGATCGCA CTGGCTGCGG
ATGCCGCCCC TGATGCTGGC GACGCATCTT TGGACGAAGT GGCGGAAGCC CTCCTAG
 
Protein sequence
MSAVRTLADL LAGRREAATL APRDWDRVIT VARAEAMLGT LAHRLDETPL PSTVAALFAD 
QRAAAKVATA QALWEAEMAR RALAPEGIEF VLLKGAAYAA AGLACSVGRQ IGDLDILVLA
PDIRRAENAL LNAGWEWVKS DPYDDHYYRA HMHELPPMIH KARDRMIDVH HTILPRTHRI
TPDALALVSD AVTIAGGHAV LCPTDMVVHC AAHMLADGDL QGGLRNLWDF HCLTRDFAAA
DAGFWGKLDA RAELHGLRAA VRRAARLARD LYGSVLPSGW DGQNGSDLWY RRRLLARDDW
GRVTNPLLEQ AFYIRSHWLR MPPLMLATHL WTKWRKPS