Gene Sala_1349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1349 
Symbol 
ID4082817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1408534 
End bp1409280 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content64% 
IMG OID638009715 
Producthypothetical protein 
Protein accessionYP_616396 
Protein GI103486835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0270376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAT TCGACATGGG CGCGGCGTGG GACGACACCT TGCTGCTGCT CAAATCGCAT 
ACGGCGCTGA TCGTCACGAT CGCCGGTGTT TTTTTCTTTC TGCCCGCGCT CGCCTTTGCC
TGGTTCGGAC CCGTGCCGGT CGAGCCGCCC GCGGGCGCCG ATTTCGATCA GCTGATGACC
GCTTTTCGGG AAAGCTTCCG CCAGATGATC CCCGGCCAGA TCGTCGTCGC GCTTTGCACG
ATGGTCGGCA CGGTGGCGAT CCTGCGGTTG TGGCTGGCGC GCACGGGGGT CAGCGTCGGC
GAAGCGCTCA CCTTTGGCTT CATGCTTTTT CCGACGATGC TGGCGGTCCA GATATTGTCG
GGAATTGCGA TCGGCATCGG GGTGATCCTG CTGATCGTCC CCGGCCTCTA TCTCGTCGGG
CGGCTGGCGC TCGTCGCGCC GGCGATTGCG GACCGGGCGA TCTACAATCC CATCGAGGCG
ATCCGCACGA GCTGGGAACT GACGCGGAAC AACGGCTGGG CCATCTTTTT CTTCCTGCTT
CTGGTCGGGC TGGTGATCTT CATCGTCGCG CTGATCGTCG GCGGCGTTCT GTCGGTCGTC
GCGGGAAGCG GACCCGGCTT TGGCCGGATG GTTGGCGGCG TTGTCGAAGC GGCGTTCGGC
GCGATCGGCA GCCTGTTCTC GATCGCCGTC GCCGCTGCCG CCTATCGCCA GCTTGCGCTG
CGCAGCGCCT CCGACGTGTT TCAGTGA
 
Protein sequence
MTKFDMGAAW DDTLLLLKSH TALIVTIAGV FFFLPALAFA WFGPVPVEPP AGADFDQLMT 
AFRESFRQMI PGQIVVALCT MVGTVAILRL WLARTGVSVG EALTFGFMLF PTMLAVQILS
GIAIGIGVIL LIVPGLYLVG RLALVAPAIA DRAIYNPIEA IRTSWELTRN NGWAIFFFLL
LVGLVIFIVA LIVGGVLSVV AGSGPGFGRM VGGVVEAAFG AIGSLFSIAV AAAAYRQLAL
RSASDVFQ