| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1348 |
|---|
| Symbol | |
|---|
| ID | 4082816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1407547 |
|---|
| End bp | 1408428 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638009714 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_616395 |
|---|
| Protein GI | 103486834 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.293308 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0280639 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA TGACGATCGG CGGCGCCTTT TCGGAAACGT TCGCGTTTCT GAAGGCCAAT
TGGATGCAGA TGCTGTTGTG GGTCGGCGGG GCGCTGATCC TTGTCGGCCT GCTCGGTTAT
CTGTTTTTGG GGTCGACCTT TTCGGCGATG GCGATGGCGC CGAACGATCC GTCGCTCGTC
ATGGGCGCCT TCGGCCGGAT CGGCCTCTTT GCGATCATCG CGGCGGTCAT CTTCTATGGC
GTGTCGATGC TCATCTGGCG CGGCGGGATG CACCCCGGCG AAGCGCCGAA CTTCGCCTGG
GCCCTTCAGG CCGGACCGGC GCTGGCCTTT GGCATGATCG TGGTGATGAT CGCCGCCTAT
ATCGTCATTT TCATCGTCAT GCTCATCCTG ACGCTGATTT TCGGCGCGGC GCTCGGCGGC
ATGGGCGCCT TTTCGCCCGC GGCGCTGGAA TCCGGCGGCG CCGGGGCGAT CGGCGGTGGC
GCGATCTTTG TGATGATCGT CGTCTATATC GCGATCATTG TCTTCATGCT GTGGCTTCAG
GGCCGCTTCA TCGTCGCGGG GCCGGTGATG GCTGACCGCC TGACGCGCAA TCCGGTGACG
GGGCTTGGTG AATCGTGGCG GCTGACCGGG CCTTCGCAGT GGGTGATCGT TGGGTTCTAC
CTGCTCTTCA CCATCGGCGT CGTCGCCTAT GCGATCGTCG CGGGCATGAT CTTCGGCGGC
ATCCTGGGGG CGATCGCCGG GGGGTCGGTC GTCGGCGCGA TGTTGACGAT GATCCTGATG
GCGGCGCTTG TCTATCTGCC GATCATGATG CTTTCTTTCT CGGTGCCGGT CGGCGTGTAT
CGCGCTATCG CTCCGCGCGC ATCGGGCGAC ATCTTCGCCT GA
|
|---|
| Protein sequence | MNKMTIGGAF SETFAFLKAN WMQMLLWVGG ALILVGLLGY LFLGSTFSAM AMAPNDPSLV
MGAFGRIGLF AIIAAVIFYG VSMLIWRGGM HPGEAPNFAW ALQAGPALAF GMIVVMIAAY
IVIFIVMLIL TLIFGAALGG MGAFSPAALE SGGAGAIGGG AIFVMIVVYI AIIVFMLWLQ
GRFIVAGPVM ADRLTRNPVT GLGESWRLTG PSQWVIVGFY LLFTIGVVAY AIVAGMIFGG
ILGAIAGGSV VGAMLTMILM AALVYLPIMM LSFSVPVGVY RAIAPRASGD IFA
|
|---|
| |