Gene Sala_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1326 
Symbol 
ID4080997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1384429 
End bp1384893 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content63% 
IMG OID638009689 
Producthypothetical protein 
Protein accessionYP_616373 
Protein GI103486812 
COG category[S] Function unknown 
COG ID[COG4719] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01451] conserved repeat domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.486859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0795456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCCG CCCTCCTGCT TATGCTCGCA GCCGCGCTTC CCGGTCCGGC CTTTGCCGCC 
AATCAGGTTG CGCTCGACAA TCTTGTTTTC GTCGAGCGTG TATCCACCGA CGCGGATGGC
AAGCAGCACA TCCTGCTCGA AGAACCGAAG GTCGTCATTC CCGGCGACCG GCTCGTCTTC
GTGCTCAATT ATCGTAATGC CGGCGCACAG CCCGCCGACA AGTTCGTGAT TACCAATCCG
ATGCCCGCCG CGGTCCGTTT CGCCGATGCC GGCGACACGC AGCCTTTGGT TTCGGTCGAT
GGTGGCACAC AGTGGGGACG GCTTGGCGAG CTTTCGGTCG CTATGCCCGA CGGCACGCGC
CGCGCCGCGC AACCCGCCGA CGTCACGCAT ATCCGCTGGG CCTTTCAAAA GCCGATTCCG
GCGGGCGCCA CGGGCAAGCT CATGTTTCGG GGAATCGTCA AATAG
 
Protein sequence
MRPALLLMLA AALPGPAFAA NQVALDNLVF VERVSTDADG KQHILLEEPK VVIPGDRLVF 
VLNYRNAGAQ PADKFVITNP MPAAVRFADA GDTQPLVSVD GGTQWGRLGE LSVAMPDGTR
RAAQPADVTH IRWAFQKPIP AGATGKLMFR GIVK