Gene Sala_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1317 
Symbol 
ID4082241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1374647 
End bp1375537 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content65% 
IMG OID638009679 
Productfructose-1,6-bisphosphate aldolase 
Protein accessionYP_616364 
Protein GI103486803 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3588] Fructose-1,6-bisphosphate aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.274126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CCAATGCCGA GATGCTGGAC CAGATCAAGT CGGGGCAGGG CTTTATCGCC 
GCGCTCGACC AGAGCGGCGG GTCTACGCCC AAGGCATTGA AGGGCTATGG CATCGGCGAG
GACGCTTTTT CGAACGACGA GGAGATGTTC GCGCTGATCC ACGACATGCG CAGCCGCATC
GTCACCGCGC CCTGCTTCAA CGGCGAAAAG GTGATCGGCG CGATTCTGTT CGAACGCACG
ATGGACGGCC AAGCAGGTGG CAAGCCGGTG CCGTCGCTGC TCTGGGAACG TGGCGTCGTG
CCCTTTCTGA AGGTCGACAA GGGGCTCGAA GACGAAGCCG ACGGCGTCCA GTTGATGAAA
GCCAATCCCG GTCTCGACGA TCTGTGCGGG CGCGCGGTTG CAAAGGGCGT GTTCGGCACC
AAGATGCGCA GCGTCGTCAA TCTGGCCCAC CCGGTCGGGA TCAAGGCGAT CGTCGATCAG
CAGTTCGCGG AAGCCGCGCG CATCGCCACG CACGGCCTTG TCCCGATCAT CGAGCCCGAA
GTGAACATCA AGAGCGCCGA GCGCGATGCG GCCGACCGGC TGCTGCTGAA AGAGCTTCTC
GCGGCGCTCG ACGGCTGGAC CGGCGCGCCG GTGATGCTGA AATTGTCGCT GCCTGCCGAG
GCGGGGCTGT TCCAGCCGCT GGTTGATCAT CCCAGGGTGC TGCGCGTCGT CGCGCTGTCG
GGCGGCTTCA CGCGCGGCGA AGCATGCGCC GAACTGGCGA AGAACCCCGG CATCATCGCG
AGCTTCAGCC GCGCCCTGCT CGAAGACCTG CGCCACCAGA TGAGCGACGA CGAGTTCAAC
GCCTCGCTCG GCACCGCGAT CGACGAGATT CACGCGGCCT CCGTGGCCTG A
 
Protein sequence
MTTANAEMLD QIKSGQGFIA ALDQSGGSTP KALKGYGIGE DAFSNDEEMF ALIHDMRSRI 
VTAPCFNGEK VIGAILFERT MDGQAGGKPV PSLLWERGVV PFLKVDKGLE DEADGVQLMK
ANPGLDDLCG RAVAKGVFGT KMRSVVNLAH PVGIKAIVDQ QFAEAARIAT HGLVPIIEPE
VNIKSAERDA ADRLLLKELL AALDGWTGAP VMLKLSLPAE AGLFQPLVDH PRVLRVVALS
GGFTRGEACA ELAKNPGIIA SFSRALLEDL RHQMSDDEFN ASLGTAIDEI HAASVA