Gene Sala_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1295 
Symbol 
ID4082587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1354166 
End bp1354966 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content68% 
IMG OID638009657 
Productbiotin--acetyl-CoA-carboxylase ligase 
Protein accessionYP_616342 
Protein GI103486781 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGTTG GCGGTTGGTT ATCTGTTCAT CCCGGCGCTT GCGGTGGCTT CGGCGCACGC 
CGCATCGGTG CTGTTCTGAT CCCGCCGATC GAGCGTATCG CGCAGACAGG TTCGACCAAT
GCCGACCTGC TGGCGCGGCT GGCGGGCGGC GAGCATGTCG GCGAGGGTCA CTGGCTGGTC
GCCGACCGTC AGACCGCCGG GCGCGGGCGC CTGGGGCGCA GTTGGAACGA CGGGCAGGGC
AATTTCATGG GGTCGACGGT CGTTCACCTG GCCGTCGGCG ATCCGTCGGC GGCGACGCTG
GCGCTTGTTG CCGGGGTTGC GCTTGCCAGA ACCGTCGCGG CGCTCGCGCC CGATAGCGGC
GCGCAGCTCA AATGGCCGAA CGACCTGCTG GTGGATGGCG CCAAATGCGC CGGCATATTG
ATGGAGCGCA TCGGCGATTC GGTGGTGATC GGTATCGGTG TCAATCTCAC CAGCGCGCCC
GAACTGCCCG ATCGTCCGAC CGCAACGCTG TCCAGCAACG GCGCGGCAAT CGACCGCGAC
CATTTTGCGG GTGCGCTGGG CATCGCGATG ATCGACGCGC TGCGGACCTG GCGGCAGGAG
GGCGTCGCGA GCATCCTGCG CGCCTGGCTG CCGTTCGCGC ACCCCGTCGG CACGCCGCTG
CGCGTTTCGG AGCAGGGCAT CGACGGCTTT TTCGACGGGC TTGCCGAGGA TGGTGCGCTG
CGCTTGCGCC GCGAGGGCGG GGAGACCATG CTGATTCATG CGGGCGACGT CGAACTTCGC
CGCCCGGTGG TTGAAGGATA A
 
Protein sequence
MAVGGWLSVH PGACGGFGAR RIGAVLIPPI ERIAQTGSTN ADLLARLAGG EHVGEGHWLV 
ADRQTAGRGR LGRSWNDGQG NFMGSTVVHL AVGDPSAATL ALVAGVALAR TVAALAPDSG
AQLKWPNDLL VDGAKCAGIL MERIGDSVVI GIGVNLTSAP ELPDRPTATL SSNGAAIDRD
HFAGALGIAM IDALRTWRQE GVASILRAWL PFAHPVGTPL RVSEQGIDGF FDGLAEDGAL
RLRREGGETM LIHAGDVELR RPVVEG