| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1281 |
|---|
| Symbol | |
|---|
| ID | 4082532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1338188 |
|---|
| End bp | 1339123 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638009641 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_616328 |
|---|
| Protein GI | 103486767 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTC CTGCATCCCC CGCCGCCTCG CCCAGCCAGC GCGCGCGCAA GCCCGACTGG
ATCCGCGTCA AGGCACCGAC CAGCCCCGGC TATGCCGAAA CGCGCAAGCT GATGCGCGAG
CTGAACCTGC ACACCGTGTG CGAGGAAGCG GCGTGCCCGA ACATCGGCGA GTGCTGGACC
AAGAAGCACG CGACGGTGAT GATCCTTGGC GACACCTGCA CGCGCGCCTG CGCTTTCTGC
AACGTCAAGA CCGGCATGCC GCGCCCCGTC GACCTGCTCG AACCGGAACA TACGGCGATC
GCTGCGGCGA AGATGGGACT CAGCCACATC GTCATCACCT CGGTCGACCG CGACGACCTG
CCCGACGGCG GCGCGAGTCA GTTCGTCAAG GTCATCAACG CGCTGCGCCG CGAAACGCCG
CAGACGACGA TCGAGATACT GACCCCGGAC TTTCGCAACA AACCCGAAAG CGCGGTCGCC
GCGATCGTCG ATGCGCGCCC CGACGTCTAT AACCACAACC TCGAAACCGT GCCGCGGCTC
TATCCGACGA TCCGTCCCGG CGCGCGCTAT TATGCGTCGC TCCGCCTGCT CGAAAGCGTC
AAGCGGCGCG ACCCGTCGAT CTTCACCAAG TCAGGCATCA TGCTCGGGCT CGGTGAGGAG
CGGATGGAGG TGCATCAGGT GATGGACGAC ATGCGCAGCG CCGACATCGA TTTCATGACG
ATGGGCCAAT ATCTGCAACC GACGCCGAAA CACGCCAAGG TGATCGACTT CGTCACCCCG
CAGGCGTTCG ACGCCTATGC GCAGATCGCG CGCGCCAAGG GTTTCCTGCA GGTGGCGTCA
TCGCCGCTGA CGCGCTCCAG CTATCATGCG GGCGACGATT TCGAACATAT GCGCGCGGCG
CGCGAGGCGC AGCTCGCGCG CGTCCGCGCC GACTGA
|
|---|
| Protein sequence | MNAPASPAAS PSQRARKPDW IRVKAPTSPG YAETRKLMRE LNLHTVCEEA ACPNIGECWT
KKHATVMILG DTCTRACAFC NVKTGMPRPV DLLEPEHTAI AAAKMGLSHI VITSVDRDDL
PDGGASQFVK VINALRRETP QTTIEILTPD FRNKPESAVA AIVDARPDVY NHNLETVPRL
YPTIRPGARY YASLRLLESV KRRDPSIFTK SGIMLGLGEE RMEVHQVMDD MRSADIDFMT
MGQYLQPTPK HAKVIDFVTP QAFDAYAQIA RAKGFLQVAS SPLTRSSYHA GDDFEHMRAA
REAQLARVRA D
|
|---|
| |