Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1249 |
Symbol | |
ID | 4080320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1300431 |
End bp | 1302407 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638009609 |
Product | hypothetical protein |
Protein accession | YP_616297 |
Protein GI | 103486736 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0525958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCC CGGGTCAGTT CTCAGCGCAA ATCAACATTG AGGTGGCCGA CCGTGCCTAT TACCAGATTG GTGAGGGCGC ACAGAAGCTC AGGATCGATG GGTATGCAGG TGACCCACGC GACGCAGAGG GTGTTCTCGG ACTGATCGTC TGTGATTTCG TTGACGGCGA CGAAGTTCAG ACCTTCGGGA AATCCGACGT TTCGCCTATC CTCAATCCTC TGATCCGCTT CCTTAAAAAA GCCCGGACCG AAGAGTTCAG GGATTCGTTG AATGAAGTCA GCCCCGCATT TCAGGTCTCG GATTTGATCA TCACCACGTG GTCGCGGGTC ACTAAGGTCA AGCTGATCCT TGTTTCGAAC CGCCAGTATA TCGGCCGGGA TGACGCGGTG AAACTTGCAG AACTTGGCGA TGTACCAGTC ACCTGGTCTG TATGGGATCT CGCACGATTC GAACGTTTCG ACCGATCCGG TCAGGCGCGA GAGGATATGG TGATCGATTT CGCCAATGAT TTCGGCGCTC CCCTACCTGC GCTCAAGGCT TCCCAGACCG ACGCAGCTCT CGAGAGCTAT CTAATGATCG TGCCAGGTCA GCAGTTGGCA GCGATCTATG ATCGATGGGG CGCGCGCCTG CTGGAGGCGA ATGTGCGGTC TTTTCTTCAG GCGCGGGCGA AGACGAACAA GGGCATCCAG AAGACCGTTA AGGAGGAGCC TGAGCTCTTC TTTCCATACA ACAATGGACT ATCCGCCACG GCAGACGAAG TCACCTGTGT TCGTTCGGAA GAAGGTCTTG CGATTGCTTC CATTAACAAT TTGCAGATCG TAAACGGAGC GCAGACGACA GGATCGATTC ACAGCGCACT TAAAACGGCG AAGGAGCAGC TTTCGCATGT ATTCGTGCAA ATGAAGCTGA CAGTGGTGCC TCCTGATCGG TCAGAGGAAA TTGTGCCAAA GATATCGGAG TACGCCAATA CTCAGAACAA GGTGAATGCG GCCGACTTTT TTTCCAATCA CCCCTTCCAC ATCCGTATCG AGCAGTTTTC TCGGAGCGTC ATCTTCACTG CGCGTGAAGG TGAGCGTCAC GACAGCAAGT GGTTCTATGA GCGTTCTCGC GGTCAGTTCA TCAACGCGCG GAGCCGACTT ACGGTCGCAC AGCAGAAGAA GTTTGATCTA GAGTTCCCCA AGGCGCAGCT CTTTAGCAAG ACTGACCTAG CGAAGTTCGA ATACTCGGCC TCCGGGCATC CTCACATTGT TTCGCGGGGG GCGCAGAAGA ACTTTGCCGA TTTCGCGAGA GAGATCGGTG AGGCCTGGCC AAAGAGCGAC AGCAAGTATG ATGAACTTTG GTATCGGCGC CTGATTGCAA AGGCCATCAT CTTCCGCAGG TTGGAAAGCG AAGTGCCAAA GCAAGATTGG TACGAAGGCG GCTATCGCGC CAATATCGTC ACCTACGCCA TGGCAAAAGT GTTTCACGAT GCCAATGGCC AGAAACAGAT GCTCGATCTC GACACCATCT GGCGGCGGCA GGCGGTTTCC GATGCCCTTC TGCGCGCCCT GCTTCTCGCC GCGGCGGAGG CTCATGATGC GATTACGCAT CCTCCGACTG GCGTTCGCAA CATGTCGGAA TGGGCAAAGC AACAGGCCTG TTGGAACGGC CTTAAGAGCC GAACACTGAA GTATGGGGAA GATTTCGGAA GTTGCTTGGC CCTCGTAGAT ACCGTTCGCA CCGAGGAACG CGAAGCTCGC GCTAACACGG TGTTGACAGA GGGCATAAAC GCTCAGGCCG AAGTCGTGAA ACTTAAGGCT CCATTCTGGA ATAATGTAAT GGAATGGGGG CGGGCGAAAA AGAAACTGAC TCCTAAGGAT ATGCAAGTTC TAGAGATTTG CAGTTCGATG CCGCGACGGA TACCCACCGA TTTCCAGGCA AAGCACGCGC TCGAGGTGCT TGCGCGCATT CGTGAACACG GGTTCGATAG CGGCTGA
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Protein sequence | MKIPGQFSAQ INIEVADRAY YQIGEGAQKL RIDGYAGDPR DAEGVLGLIV CDFVDGDEVQ TFGKSDVSPI LNPLIRFLKK ARTEEFRDSL NEVSPAFQVS DLIITTWSRV TKVKLILVSN RQYIGRDDAV KLAELGDVPV TWSVWDLARF ERFDRSGQAR EDMVIDFAND FGAPLPALKA SQTDAALESY LMIVPGQQLA AIYDRWGARL LEANVRSFLQ ARAKTNKGIQ KTVKEEPELF FPYNNGLSAT ADEVTCVRSE EGLAIASINN LQIVNGAQTT GSIHSALKTA KEQLSHVFVQ MKLTVVPPDR SEEIVPKISE YANTQNKVNA ADFFSNHPFH IRIEQFSRSV IFTAREGERH DSKWFYERSR GQFINARSRL TVAQQKKFDL EFPKAQLFSK TDLAKFEYSA SGHPHIVSRG AQKNFADFAR EIGEAWPKSD SKYDELWYRR LIAKAIIFRR LESEVPKQDW YEGGYRANIV TYAMAKVFHD ANGQKQMLDL DTIWRRQAVS DALLRALLLA AAEAHDAITH PPTGVRNMSE WAKQQACWNG LKSRTLKYGE DFGSCLALVD TVRTEEREAR ANTVLTEGIN AQAEVVKLKA PFWNNVMEWG RAKKKLTPKD MQVLEICSSM PRRIPTDFQA KHALEVLARI REHGFDSG
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