Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1215 |
Symbol | pgi |
ID | 4080439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1256425 |
End bp | 1257930 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009576 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_616264 |
Protein GI | 103486703 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0709148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATTG CCTCCGACGC CTGGCAGGCC CTTGCCGACT GGCAACCGCA AAAGCTCACC GATCTGGTCG CCGCCGATCC CGATGCGCGC TTGCAGGCGC TGGTGCGCAA TGTCGCCGAC ATCCGCTTCG ACTTTGCCAA GACGCACCTC GACGCCGCCG CGATCGCCAT TCTGGCGAAC CTTGCCGAAG CGCAGGATTT CGGCGGGCGG CGCAAGACGC TGTTTTCGGG CGGTATCGCC AATCCCACGG AGAATCGCGC CGCCGAGCAC AGCGCCGAGC GCGGCGATGG AGCACCCGAA TCGGTCCATG CTGCGCAGGC CCTGCACCAA AGAATGCGGA TGATGATCGA CGCGATCGAA GCGGGGGCGT TCGGCGAGAT CCGCCACCTG CTGCACATCG GCATCGGCGG ATCGGCGCTT GGTCCCGATT TGCTCGTCGA TGCGCTTGGC CGCCACAGCG ACCGCTATGA CGTCGCGGTC GTCTCGAACG TCGATGGCGC CGCACTTGAC GAAGCCTTTG CAAAGTTCAG TCCCGAACAT ACGCTCGTCG CCGTTGCGTC CAAGACCTTC ACGACGACCG AAACCTTGCT GAACGCCAAT TCGGCGCTGC AATGGCTTGA CGAAGCGGGG GTCGCCGACC CCGTCGGCCG CTTCATCGCG CTGACCGCCA ATCCGGGCCG TGCGATGGAA TGGGGGATCG ACGAAACGCG CATCCTGCCG TTCAGCGAGA CGGTCGGCGG GCGCTATTCG CTCTGGTCGT CGATCGGCTT CCCCGCGGCG CTCGCGCTCG GCTGGGACGC CTTCGCCGAC CTGCTCGAAG GCGCGGCGGA GATGGACCGC CACTTCCGCC TTGCCGACGG CGCCGACAAT ATCTGCCTGC TCGCCGCCTT TGCCGACCAG GTCTATGCAA ACCGTCTCGG CTGTCAGACG CGCGCGGTCT TCGCCTATGA CGAGCGGCTG CGCCTGCTTC CCGCCTATCT GCAACAGCTC GAGATGGAAT CGAACGGCAA GTCGGTGACG CTGGACGGCG CGCCGCTCGC GCAGCATAGC GCCCCGGTCA CCTGGGGTGG CGTCGGCACC GATGCGCAGC ACGCGGTGTT CCAGCTGCTC CATCAGGGCA CGCACCTGGT GCCGGTCGAG TTCATTGTCG CGCGCGAGCC CGATCATCTG CTCGACGACG CGCATCACGA AACACTCGTT GCCAATTGCA TTGCGCAGGG TGCGGCGCTG ATGGCGGGGC GCGCGAGCGA CGATCGCGCG CGCGCATATC CCGGCGACCG GCCCTCGACG ACGATTTTGC TCGATCAGGT GAGCCCGCGC AGCCTCGGCG CGCTGATCGC CTTTTACGAG CATCGCGTCT TTGCCAATGC GGTGCTGCTC GGCGTCAATC CGTTCGACCA GTTCGGCGTC GAGCTGGGCA AGGAGATGGC GAAGGGGCTT GCCGAAGGGA CGGTCGACTT CGATCCAGCG ACGCAGGCGC TGATGAAGGC GGCGCTCGGC GATTAG
|
Protein sequence | MTIASDAWQA LADWQPQKLT DLVAADPDAR LQALVRNVAD IRFDFAKTHL DAAAIAILAN LAEAQDFGGR RKTLFSGGIA NPTENRAAEH SAERGDGAPE SVHAAQALHQ RMRMMIDAIE AGAFGEIRHL LHIGIGGSAL GPDLLVDALG RHSDRYDVAV VSNVDGAALD EAFAKFSPEH TLVAVASKTF TTTETLLNAN SALQWLDEAG VADPVGRFIA LTANPGRAME WGIDETRILP FSETVGGRYS LWSSIGFPAA LALGWDAFAD LLEGAAEMDR HFRLADGADN ICLLAAFADQ VYANRLGCQT RAVFAYDERL RLLPAYLQQL EMESNGKSVT LDGAPLAQHS APVTWGGVGT DAQHAVFQLL HQGTHLVPVE FIVAREPDHL LDDAHHETLV ANCIAQGAAL MAGRASDDRA RAYPGDRPST TILLDQVSPR SLGALIAFYE HRVFANAVLL GVNPFDQFGV ELGKEMAKGL AEGTVDFDPA TQALMKAALG D
|
| |