Gene Sala_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1215 
Symbolpgi 
ID4080439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1256425 
End bp1257930 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content66% 
IMG OID638009576 
Productglucose-6-phosphate isomerase 
Protein accessionYP_616264 
Protein GI103486703 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0709148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTG CCTCCGACGC CTGGCAGGCC CTTGCCGACT GGCAACCGCA AAAGCTCACC 
GATCTGGTCG CCGCCGATCC CGATGCGCGC TTGCAGGCGC TGGTGCGCAA TGTCGCCGAC
ATCCGCTTCG ACTTTGCCAA GACGCACCTC GACGCCGCCG CGATCGCCAT TCTGGCGAAC
CTTGCCGAAG CGCAGGATTT CGGCGGGCGG CGCAAGACGC TGTTTTCGGG CGGTATCGCC
AATCCCACGG AGAATCGCGC CGCCGAGCAC AGCGCCGAGC GCGGCGATGG AGCACCCGAA
TCGGTCCATG CTGCGCAGGC CCTGCACCAA AGAATGCGGA TGATGATCGA CGCGATCGAA
GCGGGGGCGT TCGGCGAGAT CCGCCACCTG CTGCACATCG GCATCGGCGG ATCGGCGCTT
GGTCCCGATT TGCTCGTCGA TGCGCTTGGC CGCCACAGCG ACCGCTATGA CGTCGCGGTC
GTCTCGAACG TCGATGGCGC CGCACTTGAC GAAGCCTTTG CAAAGTTCAG TCCCGAACAT
ACGCTCGTCG CCGTTGCGTC CAAGACCTTC ACGACGACCG AAACCTTGCT GAACGCCAAT
TCGGCGCTGC AATGGCTTGA CGAAGCGGGG GTCGCCGACC CCGTCGGCCG CTTCATCGCG
CTGACCGCCA ATCCGGGCCG TGCGATGGAA TGGGGGATCG ACGAAACGCG CATCCTGCCG
TTCAGCGAGA CGGTCGGCGG GCGCTATTCG CTCTGGTCGT CGATCGGCTT CCCCGCGGCG
CTCGCGCTCG GCTGGGACGC CTTCGCCGAC CTGCTCGAAG GCGCGGCGGA GATGGACCGC
CACTTCCGCC TTGCCGACGG CGCCGACAAT ATCTGCCTGC TCGCCGCCTT TGCCGACCAG
GTCTATGCAA ACCGTCTCGG CTGTCAGACG CGCGCGGTCT TCGCCTATGA CGAGCGGCTG
CGCCTGCTTC CCGCCTATCT GCAACAGCTC GAGATGGAAT CGAACGGCAA GTCGGTGACG
CTGGACGGCG CGCCGCTCGC GCAGCATAGC GCCCCGGTCA CCTGGGGTGG CGTCGGCACC
GATGCGCAGC ACGCGGTGTT CCAGCTGCTC CATCAGGGCA CGCACCTGGT GCCGGTCGAG
TTCATTGTCG CGCGCGAGCC CGATCATCTG CTCGACGACG CGCATCACGA AACACTCGTT
GCCAATTGCA TTGCGCAGGG TGCGGCGCTG ATGGCGGGGC GCGCGAGCGA CGATCGCGCG
CGCGCATATC CCGGCGACCG GCCCTCGACG ACGATTTTGC TCGATCAGGT GAGCCCGCGC
AGCCTCGGCG CGCTGATCGC CTTTTACGAG CATCGCGTCT TTGCCAATGC GGTGCTGCTC
GGCGTCAATC CGTTCGACCA GTTCGGCGTC GAGCTGGGCA AGGAGATGGC GAAGGGGCTT
GCCGAAGGGA CGGTCGACTT CGATCCAGCG ACGCAGGCGC TGATGAAGGC GGCGCTCGGC
GATTAG
 
Protein sequence
MTIASDAWQA LADWQPQKLT DLVAADPDAR LQALVRNVAD IRFDFAKTHL DAAAIAILAN 
LAEAQDFGGR RKTLFSGGIA NPTENRAAEH SAERGDGAPE SVHAAQALHQ RMRMMIDAIE
AGAFGEIRHL LHIGIGGSAL GPDLLVDALG RHSDRYDVAV VSNVDGAALD EAFAKFSPEH
TLVAVASKTF TTTETLLNAN SALQWLDEAG VADPVGRFIA LTANPGRAME WGIDETRILP
FSETVGGRYS LWSSIGFPAA LALGWDAFAD LLEGAAEMDR HFRLADGADN ICLLAAFADQ
VYANRLGCQT RAVFAYDERL RLLPAYLQQL EMESNGKSVT LDGAPLAQHS APVTWGGVGT
DAQHAVFQLL HQGTHLVPVE FIVAREPDHL LDDAHHETLV ANCIAQGAAL MAGRASDDRA
RAYPGDRPST TILLDQVSPR SLGALIAFYE HRVFANAVLL GVNPFDQFGV ELGKEMAKGL
AEGTVDFDPA TQALMKAALG D