| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1187 |
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| Symbol | |
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| ID | 4080835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1227605 |
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| End bp | 1228456 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638009548 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_616236 |
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| Protein GI | 103486675 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.22276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCA CGATGCGGGA GACGGGCTGG GCCAAGATAA ACCTTGCGCT CCACGTCCGC
GCGCGGCGCG CCGACGGCTA TCACGATATT GAAACGCTGT TTGCCTTCGT CGATGGCGGC
GATACGATCG AAGCCGCCCT TGCCGCCACC GACACGCTTG TCATCGACGG TGAGTTTGCC
GAAGGCCTGA GTTCGGGCGC CGACAATCTG GTGCTGCGCG TACTTGCGCT GCTGCGCGCA
CGCTATGGCG CCGATCGCGT GCCGCCGCTC GCGGTAAGGC TGACGAAGCG TTTGCCGTTG
GCGGCGGGGA TCGGCGGCGG CTCCGCCGAT GCCGCGGCGA TGGCGCGGCT GGTCCGCACG
CATTTCCTTC CCGAACTGGG TGATGCGACG CTCGCGCGCA TCGTCGGTCC GCTCGGTGCT
GATATTGCCG CCTGCGTGGC GAGCACGACC TGCATGGGTT CGGGGACCGG CGAGGATCTG
CACGCCGTCG CGGGTCTGCG GATCGCGGGC GTACCGGTGC TGCTGGTCAA TCCGCGCCAG
CCCGTCGCGA CAGGGCCGGT CTTTGCCGCG TGGGACGGGA TCGACCGCGG GCCGCTCTAC
ATTGGCACGG ACTACCGGGC GCAGTTGATC GGCGCGCGCA ACGATTTGCA GCGCCCCGCG
CTCGCCGCCT GCCCTGCGAT TTCCGACATA TTGCTTGAAC TCGGCGCGCT GCGACCGTGG
CTCGCGCGCA TGTCGGGATC GGGAGCGACC TGCTTCGCGC TGTTCGATGC GGCGGCCGAC
CGCGACGCGG CAAAGGCAGT GCTCGCCGCA CGGCATCCGG GATGGTGGCT GATGGCAGGC
GCGCTGCGAT GA
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| Protein sequence | MSATMRETGW AKINLALHVR ARRADGYHDI ETLFAFVDGG DTIEAALAAT DTLVIDGEFA
EGLSSGADNL VLRVLALLRA RYGADRVPPL AVRLTKRLPL AAGIGGGSAD AAAMARLVRT
HFLPELGDAT LARIVGPLGA DIAACVASTT CMGSGTGEDL HAVAGLRIAG VPVLLVNPRQ
PVATGPVFAA WDGIDRGPLY IGTDYRAQLI GARNDLQRPA LAACPAISDI LLELGALRPW
LARMSGSGAT CFALFDAAAD RDAAKAVLAA RHPGWWLMAG ALR
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