| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1145 |
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| Symbol | |
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| ID | 4080890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1181066 |
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| End bp | 1181875 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638009506 |
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| Product | Sec-independent protein translocase TatC |
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| Protein accession | YP_616194 |
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| Protein GI | 103486633 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.504761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA CAGCGCCCGA CAACCCGGCG GAGGAGGATG GCGCGGGCGG CAAGATGCCG
CTGCTCGATC ATCTGATCGA GCTTCGCTCG CGCTTGCTCA AATCCCTGCT CGCCATCGCG
CTTGCCTTCG GCGTCTGCTT TTATTTCGCG CGGCCGATCT TTGCGATCCT CGTCCAGCCG
TTGATCGCGG CGGGGCAGGG CAAGCTCATC TATACGCAGC TCTTCGAGGC TTTTTTCGTC
GAGGTGAAGG TCGCCTTTTT CGCATCGATG ATGATCGCCT TTCCGGTGAT CGCGAACCAG
CTTTGGAAAT TCGTCGCACC GGGCCTCTAT CGGCAGGAAA AGCGCGCGCT GCTGCCCTTT
CTCTTCGCGA CGCCGGCGCT CTTCGCAGTC GGGGCGTCCT TCGCCTATTT CATCACCATC
CCGCTCGCGC TGCGCTTCCT GCTCGGTTTT CAGGGCGATG TCGGCGGGGT CACGCAGGAA
GCCTTGCCGT CGGTCGGCAA TTATCTGGAC TTCACGATGC AGTTCATCAT GGCGTTCGGA
ATCGCCTTTC TGTTGCCGAT CCTGCTGATG CTCATCGAAC GCGCGGGGCT GGTCAGCCGC
GACCAGCTGA TTTCGGCGCG CCGCTACATG ATTGTTGCGG CCTTCGCCAT TTCGGCCGTG
GCGACGCCGC CCGATATCCT GAGCCAGTTC CTGCTCGCGG TGCCGCTGAT CCTGCTTTAC
GAATTTTCGA TCTTCGCGAT CTGGTTCACC CAGCGCCGAC GCAAAACAGG CGCCGAAACG
GCGCCTGTCG AGCCTCTCGA AGAGGCTTAG
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| Protein sequence | MSDTAPDNPA EEDGAGGKMP LLDHLIELRS RLLKSLLAIA LAFGVCFYFA RPIFAILVQP
LIAAGQGKLI YTQLFEAFFV EVKVAFFASM MIAFPVIANQ LWKFVAPGLY RQEKRALLPF
LFATPALFAV GASFAYFITI PLALRFLLGF QGDVGGVTQE ALPSVGNYLD FTMQFIMAFG
IAFLLPILLM LIERAGLVSR DQLISARRYM IVAAFAISAV ATPPDILSQF LLAVPLILLY
EFSIFAIWFT QRRRKTGAET APVEPLEEA
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