| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1135 |
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| Symbol | |
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| ID | 4081495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1172554 |
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| End bp | 1173516 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009496 |
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| Product | homoserine kinase |
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| Protein accession | YP_616184 |
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| Protein GI | 103486623 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | [TIGR00938] homoserine kinase, Neisseria type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.409003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.536831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCT ATACCCACGT CGAACCCGAC GACCTTGCCG CGCTGGTCGC CCAATATGAC
ATCGGGACGG TCGTATCGTG CAAGGGGATT GCCGAGGGAG TCGAGAACAG CAATTTCCTG
CTCGAAACAA CGCGCGGGCG CTTCATTCTG ACGCTTTACG AAAAGCGCGT CAGCGAAGGT
GATCTGCCCT TTTTCGTCGA GCTGCTCGAC CATCTAGCGA AACGCGGCTG CCCCGTTCCG
GCCATGATCC GCGACCGTGA AGGCCGGGCA ATCCAGCAGG TTTCGGAACG CGCGGCGTGC
ATCATCCAGT TCCTGCCCGG CATTTCGCTG ACCCATCCCA CGCCCGGACA GTGTCAGGCG
GCCGGCGCCG CAATGGGCGC GATGCACCGC GCGGTCGCCG ATTTCGCGGG CGCGCGCGAA
AACAGCATGG GGCATCGCCA CTGGCGCGCG ATTGCCCAGG GCGCGGGCGA TCTCGACGCG
GTGATTCCGG GATTGCAGGC CATCGTCGAC GAGGAACTCG ACCATCTCGA CGCCCACTGG
CCGCGCGACC TGCCCGCGCA TGTCGTCCAC GCTGATCTGT TCCCCGACAA TGTGCTGATG
CTTGGCGAGC GCGTCACCGG CCTGATCGAT TTCTATTTCG CAGCAAGCGA TTTTCGCGCT
TACGATGTAG CGGTAACGCA CGCTTCGTGG ACCTTCTCCA CCGATGGCAG CGACTGCGAT
ATCGGGCGCG CCAGCGCGCT GATGCGCGGC TATGCCCGCG AAGTCGCACT GACCGACGAA
GAGTTTGCGG CGCTGCCGCT GCTGGCGCGC GGCGCGGCGC TGCGCTTTTT GCTGACGCGG
GCGCACGACT GGATTCATAC GCCACCGGGC GCGCTCGTCA CCCGCAAGGA TCCGGCGCCC
TTTCTTGCAC GGCTGCGGCG TTATCAGGCG GCCGACGCGG CCGCGCTCTT CTCCGCAGCA
TGA
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| Protein sequence | MAVYTHVEPD DLAALVAQYD IGTVVSCKGI AEGVENSNFL LETTRGRFIL TLYEKRVSEG
DLPFFVELLD HLAKRGCPVP AMIRDREGRA IQQVSERAAC IIQFLPGISL THPTPGQCQA
AGAAMGAMHR AVADFAGARE NSMGHRHWRA IAQGAGDLDA VIPGLQAIVD EELDHLDAHW
PRDLPAHVVH ADLFPDNVLM LGERVTGLID FYFAASDFRA YDVAVTHASW TFSTDGSDCD
IGRASALMRG YAREVALTDE EFAALPLLAR GAALRFLLTR AHDWIHTPPG ALVTRKDPAP
FLARLRRYQA ADAAALFSAA
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