Gene Sala_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1133 
Symbol 
ID4081493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1171836 
End bp1172087 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content55% 
IMG OID638009494 
Producthypothetical protein 
Protein accessionYP_616182 
Protein GI103486621 
COG category[S] Function unknown 
COG ID[COG3422] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.433125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.699348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCGCGA AAATCGCTCG ATTAGCATGG CCTTCGGCCG CCAGCCCCGG CGCGGCGCGA 
CCAGTGGAGG ATGGCATGGC CCATTATTTC GAGATCAAGA AGAACAAGGT CGGCGAATTT
GTCGCCTATT TCAAATATAA TAGCGAAACG ATCTTCTGGA CCGAGGGGTA TAGCAGCAAG
GCATCGGCGA AGAACGCCAT CGAGTCGATT CAGAAGAATG GACCGGGTGC CGAAGTCCGC
GAAACCGAAT AG
 
Protein sequence
MRAKIARLAW PSAASPGAAR PVEDGMAHYF EIKKNKVGEF VAYFKYNSET IFWTEGYSSK 
ASAKNAIESI QKNGPGAEVR ETE