| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1070 |
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| Symbol | |
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| ID | 4082335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1102414 |
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| End bp | 1103232 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009431 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_616120 |
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| Protein GI | 103486559 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0324215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCCTC GGCCCCACCC CGCGCAGGAC AACAACGCCG GAAATCGCGT TTCGCTCCAG
CAAACTGGTC CGCTTTGCCA TCTTGTCGTC CTATTGCCGT TGAGTGCACC GGACAAGGCG
GTTATTCCCG GCTCGATGGG GGACAGCGAG ACACCGGACC ACGTTGGGCA TCGCGCACGG
CTGCGATCGC GCTTGCTCGA AGACGCCGAC GGTCTCGCCG ACTATGAACT GGTCGAATAT
CTCCTCGCGC TCGCCATTCC GCGCCGCGAT ACCAAACCGC TCGCCAAGGC GCTGCTGCGC
GAGTTCGGTT CGCTGGCGCA GCTCGTGAGC GCCGACCCCG AATCGCTGCG CCGCGTCGAC
GGGTTGGGCG ACACCGGCAT CGCCGCCCTC AAAATTGTCC AGGCCAGCAG CCTGCGCCTT
CTGAAAGGCG AGTTTCGCGA CAAGCCGCTG CTGTCGAGCT GGGACGCATT GCTCGACTGG
CTACGCGCCG ATATGGGGCC GATCGACGTC GAGCGGGTGC GGATCCTCTA TCTCAACTCG
CGCAACATGT TGATCCGCGA CGAGCTCGCG AGCGAGGGGT CGATAGACCA GTCGGCCATC
TATGTGCGCG AAGTGATCCG GCGCGCGCTC GAACTTGGCG CTTCGGCGAT CATCATCGTC
CACAACCACC CAAGCGGCAG CCCCGAACCC AGCCGACAGG ACATCGCAGT CACGCGCGAG
ATTGCCGAGG CCGGAACGCG GCTGGGTATC GTGCTGCACG ACCATATCAT CGTCGCCGGA
TCGGATTACC GCAGCTTCCG CGCCCTCGGC CTGCTCTGA
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| Protein sequence | MVPRPHPAQD NNAGNRVSLQ QTGPLCHLVV LLPLSAPDKA VIPGSMGDSE TPDHVGHRAR
LRSRLLEDAD GLADYELVEY LLALAIPRRD TKPLAKALLR EFGSLAQLVS ADPESLRRVD
GLGDTGIAAL KIVQASSLRL LKGEFRDKPL LSSWDALLDW LRADMGPIDV ERVRILYLNS
RNMLIRDELA SEGSIDQSAI YVREVIRRAL ELGASAIIIV HNHPSGSPEP SRQDIAVTRE
IAEAGTRLGI VLHDHIIVAG SDYRSFRALG LL
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