Gene Sala_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1033 
Symbol 
ID4082316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1068389 
End bp1069021 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID638009393 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_616083 
Protein GI103486522 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAGGA TCGACGACAA TCCGCCGGGG GTGGTGGCGC GCGCGGTGCG CCGCCTGTTG 
CTGCTGCTCT ATCGGATGCG CGGGTGGAAG GCGGTGGGCG TGGTGCCCGA ACCGCGGCGC
TTTATCATCA TTGCGGCGCC GCATACGAGC AATTGGGATT TCGTCAACTT CCTGGGGCTC
ACCGCCGACC TTAAGCTGCG GCCCTATTTC ATGGCGAAGC TGTCGTTGTT CCGTTGGCCG
ATCGGCGGCT TTATCCGCCA GATGGGCGGG GTGCCGGTCG ATCGGCGCGG CGGCGGCGGC
GACGTCGTGC AGATGATTGG CGAGTTCGCC CGCCGCGAGG AGTTCATGCT GACCGTCGCG
CCCGAAGGTA CGCGCGGCAA GGCGGCGAAG TGGCGCACCG GATTTTACCA GATTGCGCTC
GGCGCCAAGG TCCCGCTGGT CGTCGGGCTG ATGGATTATG GCACCAAGAC CGGCGGGCTG
GGGCCGCTGA TCTGGCCGAC GGGCGATTTT CGCGCCGACA TGCAAAAGGT GTTCGAGGTC
TATAAAAGCT GTATCCCCAA ATATCCCGAC CGGGCGGTGC GCTCGATCGA CGATATTGTC
GGGGGCGACA CGGACGAAGA GAGGCCGATA TGA
 
Protein sequence
MTRIDDNPPG VVARAVRRLL LLLYRMRGWK AVGVVPEPRR FIIIAAPHTS NWDFVNFLGL 
TADLKLRPYF MAKLSLFRWP IGGFIRQMGG VPVDRRGGGG DVVQMIGEFA RREEFMLTVA
PEGTRGKAAK WRTGFYQIAL GAKVPLVVGL MDYGTKTGGL GPLIWPTGDF RADMQKVFEV
YKSCIPKYPD RAVRSIDDIV GGDTDEERPI