| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1028 |
|---|
| Symbol | |
|---|
| ID | 4082311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 1062032 |
|---|
| End bp | 1063222 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638009388 |
|---|
| Product | Fmu (Sun) |
|---|
| Protein accession | YP_616078 |
|---|
| Protein GI | 103486517 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCG CTGCGCGCAT CCAGACCGCC ATCGAAATCC TCGACGCCAT CGCTGCCGCC
GCGCGCGAGG GCGGGGCGCC TGCGGACGCG ATCCTTGCCG AAGCGATGCG CGCGCGCCGC
TATGCGGGGT CGAAGGACCG CCGTGCGATC CGCGCGCTCG TCTATGACGT GATCCGCGCC
GTGCGCTCGG CGCCCGAGTC GGGCCGCGCG GCGATGCTCG CGCTTGCCGA TGCGCAGCCC
GGCCTAGCGG CGCTGTTCGA CGGTTCGGCT TATGGCCCGG CGCCGATCGC CGCCGACGAG
CCGCGCGCGC AGACAGGCGT TGCCGCCGAG GCGCTGATCG ACCTCTTCGA CCCGCTCGTC
GGCGAGGAAG AGCATGACTC GCTGCTGGCA CGCGCGCCGC TCGACCTTCG CGTCAATCGG
ATCAAGGCGG GGCGCGCTGA CCTCGAGACA CTGTTTCCCG AAGGCGCGCC GATCCCCGGC
GCGCCCGACG GATGGCGCCT GCCGCCCGAA ACCGCCGCAG CCCAGCACCC CGCCTATGCT
GAAGGCGCGT TCGAGGTGCA GGATGCCGCA AGCCAGTACG CGTCGGCCGC GCTGGCCGCC
GCGCCGGGGC AGGCGATCGT CGATCTGTGC GCCGGTGGCG GGGGCAAGAC GCTCGCGATC
GCTTCGCTGA CCGGCAATGC GGCTGACATC CTTGCCTGCG ACACCAATCG TGCGCGCCTG
CAACAATTGC CGCGGCGTGC CGAACGGGCC GGCGCAACGC GGATCGCAAC CCGGCTGCTC
AATCCGGGGC AGGAAGTTGC GATGCTCGCC GACTGGCAGG GGAGGGCGGA TCGCGTTTTC
GTCGATGCGC CCTGTTCGGG CAGCGGCACC TGGCGGCGCA GCCCCGAACT GCGCTGGCGG
CTCACCCCTG CGCGGCTCGA CCGCCATCTC GGCGATCAGG CGAAGCTGAT CGACCTCGGC
GCCGATCTGG TGGCGCCGGG CGGCAAACTC CTTTATGCTG TCTGCTCGAT CATCGCGCGC
GAGGGGCGGG CACAGGTGGC TGATTTTCTG AACCGGCATC CCGGCTGGAC GGCCGACGCC
GACTATCTTC CCGGCGGTGT CGGGCGCGCC GCGGGCGCCG GTTTCCTGCT GACTCCGGCG
CACGACGGCT GCGACGGATT TTTTCTCGCA CGGCTGACAT CGCCATGTTA G
|
|---|
| Protein sequence | MTPAARIQTA IEILDAIAAA AREGGAPADA ILAEAMRARR YAGSKDRRAI RALVYDVIRA
VRSAPESGRA AMLALADAQP GLAALFDGSA YGPAPIAADE PRAQTGVAAE ALIDLFDPLV
GEEEHDSLLA RAPLDLRVNR IKAGRADLET LFPEGAPIPG APDGWRLPPE TAAAQHPAYA
EGAFEVQDAA SQYASAALAA APGQAIVDLC AGGGGKTLAI ASLTGNAADI LACDTNRARL
QQLPRRAERA GATRIATRLL NPGQEVAMLA DWQGRADRVF VDAPCSGSGT WRRSPELRWR
LTPARLDRHL GDQAKLIDLG ADLVAPGGKL LYAVCSIIAR EGRAQVADFL NRHPGWTADA
DYLPGGVGRA AGAGFLLTPA HDGCDGFFLA RLTSPC
|
|---|
| |