| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0974 |
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| Symbol | |
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| ID | 4079973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 998579 |
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| End bp | 1000243 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009334 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_616024 |
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| Protein GI | 103486463 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC TCCGCGACCC CTCGGTCAAA TATAGCGCCT TTCCGCAGGT GCCGCTCGCC
AAACGCGAAT GGCCCGCCCG CACCATCACC CGCGCCCCCA TCTGGCTCTC GACCGACCTG
CGCGACGGCA ACCAGTCGCT GATCGACCCG ATGGATGCCG AGAAAAAGAC CCGTTTCTTC
GACCTGCTGG TGAAGGCCGG GTTCAAGGAG ATCGAGGTCG GCTTCCCCGC CAGCGGCGCG
ACCGATTTCG ACTATATCCA GAACCTCGTC CGTTCGGGCC GCGTCCCCGA CGATGTCACC
CCGCAGGTGC TGACCCAGAG CCGCGCCGAC CTCATCCGTA CCAGCTTCGA CAGCCTCGCC
GGCGCGAAAA CCGCGATCGT TCACGTCTAT AACGCGCTCG CCCCCGCGTG GCGCAAGATC
GTCTTCGGCA TGGACAAGGA TGACATCAAG GCGATCGCGA TCGACGGCGC GAAGCAACTG
CGCGACAATG CCGCGCGGCT TCCCGATACC GACTGGCGGT TCCAGTACAG CCCCGAATGC
TTTTCGACCA CCGAACTCGA TTTCAGCATC GAGGTGTGCG AGGCGGTGAT GGAGATCCTG
AAGCCCACTT CGGCGAACCC GATCATCCTC AACCTGCCCG CGACGGTCGA GGCGGCGACG
CCGAACATCT ACGCCGACCA GATCGAATAT TTCGCGAAGA ACCTGCCGAA CCGCGACGCC
GCGATCATCA GCCTGCACAC CCACAACGAC CGCGGCACCG GCGTCGCGGC GGCCGAACTC
GGCCTGCTCG CGGGCGCCGA CCGCGTCGAG GGCTGCCTGT TCGGCAATGG CGAGCGCACC
GGCAACACCT GCCTCGTCAC CATCGCGCTC AACATGTACA CGCAGGGCGT CGATCCCGGC
CTCGATTTCT CCAACATCGA CGAGGTCATC GCGACGGTCG AGTATTGCAA CAATCTGCCC
GTCCACCCGC GCCACCCCTA TGGCGGCGCA CTCGTCTACA CCGCTTTTTC GGGCAGCCAT
CAGGACGCGA TCAAAAAGGG CTTCGCCGCG CGCGAACGCC AGAATGACGA ACGCTGGGAA
GTCCCCTATC TGCCCATCGA CCCCGCCGAC CTGGGGCGCA GCTATGAAGC GGTGATCCGC
GTCAACAGCC AGTCGGGCAA GGGCGGCGTC GCCTGGGTGC TCGAACAGGA CAAGGGGCTG
AAACTGCCCA AGAAGATGCA GGCGAGCTTC AGCCACATCG TCCAGGCGCT CGCCGACGAA
ACCAGCCGCG AACTCGGCGC CGAGGACATC TGGCAGGCGT TCGAGCGCGC CTATCTGACC
ACCGACGCCA AGCGCTTCCA GCTGGTCGAC TGGTCGGAGA GCCATGCGGG CACCGACCGC
ATCTTCGCGG GCAAGCTCAC CATCGACGGC ATAGAGCGCA GCGTCAGCGG TCGCGGCAAC
GGCCTGATGT CGAGCGTCAT CGCCGCGCTC GCCGAATCGG GCGGCCCGGT GATGGACATC
GTCGATTACA GCGAACATGC GATCGGCCAG GGCAGCAATG TGCAGGCCGC CGCCTATGTC
GAATGCCGCA CCGCCGACGG CAAAAGCCTG TTCGGCTGCG GTCTCGACAC CGACGTCGCG
ACGGCGAGCG TGCGCGCGAT CCTCAGCGCG GCGAACGGCG CCTGA
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| Protein sequence | MTMLRDPSVK YSAFPQVPLA KREWPARTIT RAPIWLSTDL RDGNQSLIDP MDAEKKTRFF
DLLVKAGFKE IEVGFPASGA TDFDYIQNLV RSGRVPDDVT PQVLTQSRAD LIRTSFDSLA
GAKTAIVHVY NALAPAWRKI VFGMDKDDIK AIAIDGAKQL RDNAARLPDT DWRFQYSPEC
FSTTELDFSI EVCEAVMEIL KPTSANPIIL NLPATVEAAT PNIYADQIEY FAKNLPNRDA
AIISLHTHND RGTGVAAAEL GLLAGADRVE GCLFGNGERT GNTCLVTIAL NMYTQGVDPG
LDFSNIDEVI ATVEYCNNLP VHPRHPYGGA LVYTAFSGSH QDAIKKGFAA RERQNDERWE
VPYLPIDPAD LGRSYEAVIR VNSQSGKGGV AWVLEQDKGL KLPKKMQASF SHIVQALADE
TSRELGAEDI WQAFERAYLT TDAKRFQLVD WSESHAGTDR IFAGKLTIDG IERSVSGRGN
GLMSSVIAAL AESGGPVMDI VDYSEHAIGQ GSNVQAAAYV ECRTADGKSL FGCGLDTDVA
TASVRAILSA ANGA
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