| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0969 |
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| Symbol | |
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| ID | 4079969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 994533 |
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| End bp | 995996 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009330 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_616020 |
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| Protein GI | 103486459 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.627718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGCG CTCCAGGGGA CAGATTCGAA ACCATGGCTA GCACGCGCGA CACGCGAATG
GTGATGATCG TCGACAGCGA GCCTGCACAG CAGCGCTTCC TGTCGGCGCT CGTGTCGCGT
GGCGGCTGGC GCAGCGTCGT GGCCGCCGAC ACCGATACCG CGCTCGCCAA GCTCGGCACG
CAGGAGGGGA TGGCCCTCGA CGCCGTTCTC ATCGATCAGG GCGCACCTGG CATGGACATT
GCCCAATTCG TGATCGAACT CCGCCGCTGG CGCCCCGCAC TGCCACTCGT CGTCATCACC
ATGCGCAACG GGGTCGAGGT TGCGGTGGCG GCGATGCGCG CCGGGGCGAG CGACTTCGTC
CAGAAACCCA TCGCGCCCGA CCGGCTGCTC GAAGCGCTCG ACCGGGTGAT GGCCGACAGC
GGCCCCCAAG GCGAGCTGCG TCCGCTAACC GAAAAGCTGC GCGCGCCGCT CGCGTTCGAG
GAAATCATCG GGTCCAGCCC CAATTTCCGC ACGGCGCTCG CCATCGCAGC CAAGGCCGCA
CGCGCGCGAG TTCCGGTGAT GATCAACGGC AAACCCGGCA CCGGCAAGGA GGTCTTTGCC
CGCGCGATCC ATGGCGCGAG TCCGCGCGCA CGCGGCCCGC TCGTCATGGT CGATTGTTCG
GCGGTTTCGC CCGGCCTGAT CGGATCGGGG CTGTTCGGCC ACGAACGCGG CGCCTTTCCC
GGTGCCTTCG ACCGCCAGAT TGGTCGTCTT GTCCAAGCCG ACGGCGGCAG CATCATCATC
GACCATGTCG AGTGCATCCC GCTCGACACC CAGGCAAAGC TCGTCGAGTT TCTGAACAAC
GGCGAGCTGC AGATGATCGG CGGGTCGATC CGCCAGACCG TCGATGTGCG CATTATCGCG
ACGAGCGCCA GCCCGCTCGA CAAGCTCATC GAGGCGGGTC ATTTCCGCGA AGATCTGTTC
TACGCGCTGT CGAGCGCGCA GCTCACCCTG CCTTCGCTCA GCGAGCGCCG CGGCGACGTC
GGCCCGCTCG CGCGCCACCT GCTCGCGCGG ATCGGCGGTC TCCCCGGCAT GGGGTCGATC
GGCATCACTG ACGACGCGCT GCGCCTGCTT GCCGCCTATG CCTGGCCGGG CAATGTCCGC
CAGCTTCAGG ATGTGCTGTT CCGCGCCGCA GTGGGCAGCA CCACCGATGT CCTGACCGCC
GCCGATTTCC GTGCAATCGA AGCGACGCTC GCCGGCGGCA CCGCCAGCGA CGGCGAGGTG
GCGATCAACG GCGAGGCGAT CGGCGTCACG CTCTACCTGC CTGACGGCAA TCTGCGTCCG
CTCGAGGAGA TCGAGGCCGA CGTCATCCGC CTCGCGATCG GCCACTATCG CGGCCGCATG
AGCGAAGTCG CCCGGCGGCT GGGGATCGGG CGTTCGACGC TCTATCGCAA GCTCGGCGAC
CTCGGGATCG ACACGGCGGC CTGA
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| Protein sequence | MHSAPGDRFE TMASTRDTRM VMIVDSEPAQ QRFLSALVSR GGWRSVVAAD TDTALAKLGT
QEGMALDAVL IDQGAPGMDI AQFVIELRRW RPALPLVVIT MRNGVEVAVA AMRAGASDFV
QKPIAPDRLL EALDRVMADS GPQGELRPLT EKLRAPLAFE EIIGSSPNFR TALAIAAKAA
RARVPVMING KPGTGKEVFA RAIHGASPRA RGPLVMVDCS AVSPGLIGSG LFGHERGAFP
GAFDRQIGRL VQADGGSIII DHVECIPLDT QAKLVEFLNN GELQMIGGSI RQTVDVRIIA
TSASPLDKLI EAGHFREDLF YALSSAQLTL PSLSERRGDV GPLARHLLAR IGGLPGMGSI
GITDDALRLL AAYAWPGNVR QLQDVLFRAA VGSTTDVLTA ADFRAIEATL AGGTASDGEV
AINGEAIGVT LYLPDGNLRP LEEIEADVIR LAIGHYRGRM SEVARRLGIG RSTLYRKLGD
LGIDTAA
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