| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0949 |
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| Symbol | |
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| ID | 4082448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 972009 |
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| End bp | 974129 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638009310 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_616000 |
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| Protein GI | 103486439 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR02916] putative PEP-CTERM system histidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.317535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGCAA TGGACGGCCT TTCGCAGCTT TTGTCAGGCA TGGCGCTCGT CGGCTTTGCC
GGAGCGGCGC TGTGGCTGCT GTTGCGGCCC CGCGCGCGCA TGGCGGCGTT GATGCCCGCG
CCGCGCCTGC TTGCGCTGGG GGCGGCGACG ACGGCGCTGT GGGCGGCGGC CATGATGCGC
TTTACACCGG GTGCGCCGCA GGTGCTGGTG GTGCAGACGC TGCGCGACGC GGCGATGCTT
GTCTGGCTCG GCGCGACCTT CTGGTCGGCG CGCGCGCCCA TGGCGCGGTC GTTGCGACTT
ATCCTGCGGA TGCTCGTCAC TGTCTGCGTG TTGACGCTGC TGCTCGGCGT CGCGGCTTAT
TGGCGCGGCG GGGCGGCGGC GGGTCCGTGG ATGGGATCGA CGCTGACGTT CGCCGCGATG
GTGGTGGCGA CCGGTGGGTT GGTCATCGTC GATGCGGGGG TGCGTCAGGG CAGCGCTGGG
CTGAGGATGC CGGTGATGGC GGTCGCGGGC GGCTTTGCAA TGCTCTGGGC TTACCAGCTC
AACGTCCAGC TGATCGGCGC GCTGACAGGC ACGCGCGCAT CGACGCTGAT CGCGCTGCTT
CCCGCGGTCG CGCTGCTGGC GCTGCCAACC TATGTCGTGG CGGCGATGGA CATCGGGCGC
GAGCGGATGC GGTTGTCACG TCCCGCCGCG ACACGCGCGC TGACCCTGCT GGGCGCGGCC
TGCTACCTGA TCCTGATCGC GCTGACCGTT GCCGCCGCCC GCGCCATGGG CGGCGATTAT
GCGGAACTGG CGCAGGCCAT CTCGCTGCTC GCGCTGTCGG GCGCGGCAGT GCTGATGCTT
GCCTCGGCGC GGTCGCGCGC GTGGCTGTCG GTGATGATCT CGAAGCATTT TTTCGAGCAT
CGTTATGATT ATCGCGCCGA ATGGATGCGC TTCACCGCGA CGCTGGCGCA GGGCGCCAAA
GGCGACGGCG GTGAGGATGA CCGCAATCTT TACCGCCGCG TCGCCAAGGC GCTCGCCGAA
CTGACGGGCA GCCCCGGCGC GCTGCTGATG ACGCCAGCGG CCGCGGGCGG TTTTCGCATC
GCCGAACAAT GGTGCTGGCC GGGCGACGTG GCGGACGATG CGACGCTGTC GCTGCGGTCG
GCCTTCATGC TTCAGGAAAC GCAGCATATC GTCGAACTCG ATGCCGAAAG GCGCGGGCAG
GGTGGCCAGG ATCTGGCCAT CCCACAATGG TTGCTCGCCG ACACGCGCGC GTGGGTGGTC
GTGCCTGTGC TGCATTTCCA GCGGATGATC GCGATCGCGG TGCTGCACCG TCCCGCGGTG
TCGCGCGCGC TCGACTGGGA GGATCTCGAC GTGCTGCGTA TCGCGGGGCA GCAGGCGGCC
AGCTATATCG CCGAATCGCA GAGCCAGCGG GCGCTGTCCG AGGCGCGGCG CTTCGACGAG
TTCAACCGCC GCTTTGCCTT CATCATGCAC GACATCAAGA ATCTGGCGAG CCAGCTCGGC
CTGTTGGCGC GCAACGCCGA GCGCCACGCC GACAATCCGG CGTTCCGCGC CGACATGACG
CAGACGCTGA AGATTTCGGC GGGGCGGCTG TCCGATCTGC TCGTCCGCCT GTCGCCGCGC
GAGCATGCAC CGACGGCCGA TCCGGGGTGG GTTCCGGTCG AACCGATACT GAAAGACATC
GCCGCCGAAG TACGGCCGCG CCGCGAGCTG TTCATCGGGT GCGAGGCCGG CCTTGCCGCG
TGGGCCGATG CGGGCTCGGT GCGACGGATC GTCGGGCATC TCGTCGCCAA TGCGATCGAG
GCCTCTGCCG CGGGAATGCC GGTGCAGATC GTCGCGGTCG CCGAACAGGG ACGCGTGCGG
ATCGACGTGA TCGACCAGGG ATGCGGCATG ACGCGCGAGT TCATTCGCGA CGAGCTGTTC
AAGCCCTTTG TCTCGACCAA GGACAGCGGG TTCGGACTCG GGGCGTTCGA GGCGCTGCAG
TTGGCTCAGG CGATGGGCGG CGCGATCGAG GTGGCCAGCG AAGTCGGCGA AGGAAGCAAT
TTCACATTGT GGCTGCCGCT CGCCGACGCG TCCAGCGCCG CGGTGGTTGA CGCGCGGGCG
ATCAATGGGG GGCGGACATG A
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| Protein sequence | MAAMDGLSQL LSGMALVGFA GAALWLLLRP RARMAALMPA PRLLALGAAT TALWAAAMMR
FTPGAPQVLV VQTLRDAAML VWLGATFWSA RAPMARSLRL ILRMLVTVCV LTLLLGVAAY
WRGGAAAGPW MGSTLTFAAM VVATGGLVIV DAGVRQGSAG LRMPVMAVAG GFAMLWAYQL
NVQLIGALTG TRASTLIALL PAVALLALPT YVVAAMDIGR ERMRLSRPAA TRALTLLGAA
CYLILIALTV AAARAMGGDY AELAQAISLL ALSGAAVLML ASARSRAWLS VMISKHFFEH
RYDYRAEWMR FTATLAQGAK GDGGEDDRNL YRRVAKALAE LTGSPGALLM TPAAAGGFRI
AEQWCWPGDV ADDATLSLRS AFMLQETQHI VELDAERRGQ GGQDLAIPQW LLADTRAWVV
VPVLHFQRMI AIAVLHRPAV SRALDWEDLD VLRIAGQQAA SYIAESQSQR ALSEARRFDE
FNRRFAFIMH DIKNLASQLG LLARNAERHA DNPAFRADMT QTLKISAGRL SDLLVRLSPR
EHAPTADPGW VPVEPILKDI AAEVRPRREL FIGCEAGLAA WADAGSVRRI VGHLVANAIE
ASAAGMPVQI VAVAEQGRVR IDVIDQGCGM TREFIRDELF KPFVSTKDSG FGLGAFEALQ
LAQAMGGAIE VASEVGEGSN FTLWLPLADA SSAAVVDARA INGGRT
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