| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0940 |
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| Symbol | |
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| ID | 4080493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 958282 |
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| End bp | 959598 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009301 |
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| Product | peptidase M20D, amidohydrolase |
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| Protein accession | YP_615991 |
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| Protein GI | 103486430 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.397938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCG CTTTCTGGAT GGGCGCGGCG GCGCTGGCGC TGGCGGTGCC GGCATCGGCA
CAGACGCTGC GCGGCGAGGT GCAGGCGCAG ATGCCGTCGC TGATGGCGAT TTATGACGAT
CTGCACGCCA ATCCCGAACT CAGCTTCATG GAGGTGCGCT CCGCGGGGAT ATTGGCGGCC
GAGGCGCGCA AGCTGGGGTT CGAGGTCACC GAAAAGGTTG GCGGCACCGG CGTCGTTGCG
GTGATGAAGA ACGGGCCCGG TCCGATCGTG ATGGTGCGTG CCGACATGGA CGCGCTGCCA
GTTACCGAAC AGACGGGGCT GCCTGGGGCG TCGAAGGTGC GCGTCACCAC CGCCGAGGGC
GTCGAAACGG GCGTGATGCA CGCCTGCGGT CACGACACGC ACATGGCCGC CTGGGTCGGC
GTGGCGCGGT TGATGGCGGC GAACAAGGAT AAATGGTCGG GCACGCTGGT GATGATCGGC
CAGCCCGCCG AGGAACGTGG TGCCGGCGCC CGGATGATGC TTGAGGACGG GCTGTATACG
CGCTTCCCGA AGCCCGAATA TGTGCTGGCG TTCCACGATG CGGCACAGTT TCCCGCGGGC
ATGATCGGCT ATGCGCCGGG CTATGCGCTC GCCAATGTCG ACAGCGTCGA CATCCTTGTG
AAGGGCGTCG GCGGCCATGG CGCCTATCCG CAGACGACAA AGGATCCGAT CGTGCTGGCG
AGCCGCATTG TCGGCGCGCT GCAAACGCTG GTGTCGCGCG AGATCAGCCC GCTCGACAGC
GCGGTGGTGA CGGTCGGCAG CTTTCACGCT GGCGCCAAAC ACAACATCAT TTCGGACGAG
GCACGGCTCC AGCTGACGGT GCGCAGCTAT ACCGACGCGG TGCGCGATCA TCTGCTGGAC
GGCATCGCCC GCATCGCCAA GGGTGAGGCG ATCGCGGCGG GAATGCCCGA GGACCGGATG
CCCGTGGTGA CGGTGCAGAA GGACGAATAT ACGCCGGCCA CCTTCAACAC GCCCGAGTTC
ACCGAAGACA TGGCGACCTT TCTGAAGACC AGCTTCGGCG AAACGCGCGT CGTCAAGGTT
CCGCCCGTGA TGGGGGGTGA GGATTTCGGC CGCTTCGCGC GCGCGGACAA GGATATAAAG
AGCCTGATCA TCTGGGTCGG CGGCGTCCCG CAGGCCGAAT TTGATGCGGC GAAGAAGGAA
GGGCGGACGC TGCCCAGCCT CCACTCGCCC TTCTGGGCGC CCGACGCGCC AGCGGTGATT
TCGACCGCGA CCGAGGCGCT GACCGCGATG GCGATGAAGC TGATGGGGCA GCGATAG
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| Protein sequence | MMRAFWMGAA ALALAVPASA QTLRGEVQAQ MPSLMAIYDD LHANPELSFM EVRSAGILAA
EARKLGFEVT EKVGGTGVVA VMKNGPGPIV MVRADMDALP VTEQTGLPGA SKVRVTTAEG
VETGVMHACG HDTHMAAWVG VARLMAANKD KWSGTLVMIG QPAEERGAGA RMMLEDGLYT
RFPKPEYVLA FHDAAQFPAG MIGYAPGYAL ANVDSVDILV KGVGGHGAYP QTTKDPIVLA
SRIVGALQTL VSREISPLDS AVVTVGSFHA GAKHNIISDE ARLQLTVRSY TDAVRDHLLD
GIARIAKGEA IAAGMPEDRM PVVTVQKDEY TPATFNTPEF TEDMATFLKT SFGETRVVKV
PPVMGGEDFG RFARADKDIK SLIIWVGGVP QAEFDAAKKE GRTLPSLHSP FWAPDAPAVI
STATEALTAM AMKLMGQR
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