| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0901 |
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| Symbol | |
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| ID | 4082801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 909548 |
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| End bp | 910780 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638009262 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_615952 |
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| Protein GI | 103486391 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.51715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGG TAATGGAAGG CGTCCGCGTC CTGGAAGTCG CACAATTCAC CTTCGTGCCG
GCAGCGGGGG GCGTGATGAC CGACTGGGGG GCCGATGTGA TCAAGATCGA GCATCCCGTG
CGCGGCGACG CACAGCGCGG TATCCAGATG CTGCAACGGC TGGCGGTCAA TCCGCAGCGA
TCGTCGCTGA TGCAGCATCC CAATCGCGGC AAGCGCAGCG TCGGCATCGA CATTTCGACC
GAAGAAGGCC GCGCGCTGCT GTACGAGATT GCCAAGACCG CCGATGTATT TCTGACCAAC
TATCTGCCGT CGGCGCGGCA GAAGCTGAAG ATCGATATCG AGCATATCCG CGCTGCCAAC
CCCGACATCA TCTATGTCCG CGGCAGCGCC TTTGGCGACA AGGGGCCGGA ACGCGACAAG
GGCGGGTTCG ATTCGACCGC CTATTGGGCG CGCGGCGGAT CGGCGGTGCT GGTAACGCCG
AAGGCGCTCG ACGGCCCGTT GACCCAGCCC GGCCCGGCCT ATGGCGACAC GATCGGGGGC
ATGAACATCG CGGGCGGCAT CGCGGCGGCC CTGTTCCACC GCGAACGCAC CGGCGAAGCC
ACCGAGGTCG ATGTGTCGCT GCTGTCGTCC GGCATATGGG CCACCGCCTG CTCGATCGAT
GTTGCGATGG AACTGGGCAG GGATCCCTTT GAAAACCAGA TGCCCGGCGA CGCGCAGGCG
GTCGGCACCA ACCCTTTCAT GGGCGTATTC AAGACATCGG ACGGGAAATT CATCAACCTG
ACCGTGCTGT CGCCCGGCCC CTATATCGAG GATGTGTTCG GCCATCTGGG CATCCCGGAG
GCGGCGAAGG ATGAACGCTT TTCCACCGCC GAAGCGATCA TGGCGAATGC TGCCGAAGCC
TATCCGCTCG TCAAGGAGGC GATCGCGGCA AAGCCCTTCG ATTATTGGAC CCGGCAGCTC
AAGACGATGA AGGGCCAATG GGCGGCCTAT CAATCGGTGC ACGATGTTGC CAGCGACGAA
CAGGTGCTGG CCAACGACCT GATTTTCGAG GTCGAGAGCG CCGATGGCGG TCCGCCGATC
CGGCTCGTCG CCAATCCGGT GCAATTCGAT CGCGCGGGCG TCGAAAACTG TCGCGCGCCG
GAAGCTTCCG AACATACCGA ATTGTTCCTG ATGGAACTGG GCCTCGATTG GGAGCGGATC
GAAGCGCTGA AGTCCAGCAA GGCGATCGCC TGA
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| Protein sequence | MTKVMEGVRV LEVAQFTFVP AAGGVMTDWG ADVIKIEHPV RGDAQRGIQM LQRLAVNPQR
SSLMQHPNRG KRSVGIDIST EEGRALLYEI AKTADVFLTN YLPSARQKLK IDIEHIRAAN
PDIIYVRGSA FGDKGPERDK GGFDSTAYWA RGGSAVLVTP KALDGPLTQP GPAYGDTIGG
MNIAGGIAAA LFHRERTGEA TEVDVSLLSS GIWATACSID VAMELGRDPF ENQMPGDAQA
VGTNPFMGVF KTSDGKFINL TVLSPGPYIE DVFGHLGIPE AAKDERFSTA EAIMANAAEA
YPLVKEAIAA KPFDYWTRQL KTMKGQWAAY QSVHDVASDE QVLANDLIFE VESADGGPPI
RLVANPVQFD RAGVENCRAP EASEHTELFL MELGLDWERI EALKSSKAIA
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