| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0895 |
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| Symbol | |
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| ID | 4082795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 904119 |
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| End bp | 904943 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638009256 |
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| Product | 3-alpha-hydroxysteroid dehydrogenase |
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| Protein accession | YP_615946 |
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| Protein GI | 103486385 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.013191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGG ATATTCTGGG CTACGCGGGC AAACGTGTCG TCGTCATGGG TTGCTTTTCG
GGAACTGGCG AAGCTTGCGC GCGATTGCTG GTGGAACTGG GCGCCGAGGT GCACGGCGCC
GACATCAAGC CCTCGCCGGT CGGCCTTGCT TCCTTCACTG AAGTCGATCT GAAAGACCCC
GAGGCGATTG CCGCCGGTAT CGCGAAGATC GGCGGCAAGA TAGACGCCGT TTTCAACGTC
TCCGGCCTGC CACAGACCTT TCCGGGCGAG GATGTCATTA CGGTCAACTT CCTGGGCATT
CGCGCATGGA CCGAAGGCTG GATTCCGCAC CTCAACCCAG GCGCCGCGAT CGTATCCGTG
TCGTCGCTCG GCGGCATGAA ATGGCTGACC CGTCAGCCGC TGCTGCGCGA ACTCCTCGCC
ATTACCGATT TCGACGAAGC GCGGAAATGG TATCGCGAAC GCGCCGAGGA GATCGGCGAT
CCCTATAGCC TTGCCAAGGA AGCGGTGAAT ACCTGGACCC AGGTTCGCGC CCCCGACCTG
ATCGGGCAGG ACATCCGCAT CAATTGCACG ATGCCCAGCC CCATCGACAC GCCGATGCTT
GGCGAATTTC GCAAGGTCGC CGGGGATGCG GTGCTCAGCG CCTTTGCCAA GGCAAAGGGA
CGCTATTCGA CAGCCGAGGA ACAGGCATTG CCGTTGATCC TGCTAAACAG CGATGCAGCA
CGCTTCATCA GCGGGGTGTG CCTGCCCGTC GACGCGGGCC TGGCTGGCGG ACTGGCGACG
GGCGTGCTCG ACATTCAGAA AATGATCGCC GAGGCGTCGG CTTGA
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| Protein sequence | MAKDILGYAG KRVVVMGCFS GTGEACARLL VELGAEVHGA DIKPSPVGLA SFTEVDLKDP
EAIAAGIAKI GGKIDAVFNV SGLPQTFPGE DVITVNFLGI RAWTEGWIPH LNPGAAIVSV
SSLGGMKWLT RQPLLRELLA ITDFDEARKW YRERAEEIGD PYSLAKEAVN TWTQVRAPDL
IGQDIRINCT MPSPIDTPML GEFRKVAGDA VLSAFAKAKG RYSTAEEQAL PLILLNSDAA
RFISGVCLPV DAGLAGGLAT GVLDIQKMIA EASA
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