| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0890 |
|---|
| Symbol | |
|---|
| ID | 4082790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 897485 |
|---|
| End bp | 898711 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638009251 |
|---|
| Product | flavin reductase-like, FMN-binding |
|---|
| Protein accession | YP_615941 |
|---|
| Protein GI | 103486380 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTA CCGAATATCG CGGCTTTGCG GGTGTCCGGC TGGAAGCCGA AATCCGGGGT
TCGGCGGATG ATCCCGCGGT GCTGCTGGTG CATGGCGCCG GTCAGACGCG CGGCGTGTGG
TCAGGGGTTG CCGAGGCGCT TGAGCGGGCG GGACGGCGGG TGATCAGCCT CGACCTGCGC
GGGCATGGCG GCAGCGAATG GCCCGCCGAC GGACGTTATG ATTTCGATGC GATGGTCGAG
GATCTGCGCG CAGTGCTCGC CCAGCTCGGT AGTCGGCCCG TCGTCGTCGC GGCCACGCTG
GGCGGCTGGA TCGCGACCGC CGCCCTGGAA CGCGACGCCG CGCTTCTGGC ATCGGGTCTG
GTGCTCGTCG ACGTGCCGCT CGCGCTCGAT GCCGAGGTGG CGCGGCGTAT CGGCGCGCGC
CTGCGCGAGG CAGCAACGCT GGCGCCAGGA CAGGCGCAAT GGGACAGCCG GTTGCTCGAC
GCCTTCGATA GCGAGGCGGT GGTCGAACGG CTGGCGGGGG CGCCCCGGGC GATTGCGCTG
CCGACCCTCT ATGTCCGCGG GGGGCTTTCC GAACTGGTGC CGTCCGATGA CGCGGCGGCC
TTTGTCGCGA CATTCCCCGA CGGTGAGCTT GCCGAGGTCG AGGATCGGGC ATTCGTCGTT
GCCGACGACC GCAGCGAGGC ATTTGGTGGC TATCTTATCG ACTTCCTTGA ACGCCGCGCG
CCGCGCGCGT CACCCGAGTA TCGCGAGGGG TCGGATGCGC GCAGCTTTCG CGACGCGCTC
GGCTGTTTCG CGACCGGCGT GACCGTCGTG ACCGCAATGT GCCCCGACGG AACGCCGGTC
GGCCTGACCG CCAACAGCTT CACATCGGTC TCGCTCGATC CCCCGCTGTT GCTCGTATGT
ATCGCCAACA GCGCGGGAAG CGCGCCCTTT CTGCGCAAAG CCGATCGCTT TGCGGTCAAT
GTCCTGCAAA TCGGACAACA GCCGACCTCG AACCGCTTTG CGGGCAAGGG AGAAGACCGC
TTCGGCGCGA CGCCCTGGAT GGTGGGCGAA TTCGGCACGC CAGTGCTGAC CGGGTCGCTC
TCCAGCTTTG AATGCGCGCG CGAAGCGGTG CATGACGGTG GCGATCATTT CATCCTCGTC
GGTCGCGTTC TGAAGGCGAT TTTCGAACCT CGCCGGGACC CGCTTCTCTA TTTTCGCGGA
AAATATCGCA AATTGCATTT CGCGTGA
|
|---|
| Protein sequence | MSVTEYRGFA GVRLEAEIRG SADDPAVLLV HGAGQTRGVW SGVAEALERA GRRVISLDLR
GHGGSEWPAD GRYDFDAMVE DLRAVLAQLG SRPVVVAATL GGWIATAALE RDAALLASGL
VLVDVPLALD AEVARRIGAR LREAATLAPG QAQWDSRLLD AFDSEAVVER LAGAPRAIAL
PTLYVRGGLS ELVPSDDAAA FVATFPDGEL AEVEDRAFVV ADDRSEAFGG YLIDFLERRA
PRASPEYREG SDARSFRDAL GCFATGVTVV TAMCPDGTPV GLTANSFTSV SLDPPLLLVC
IANSAGSAPF LRKADRFAVN VLQIGQQPTS NRFAGKGEDR FGATPWMVGE FGTPVLTGSL
SSFECAREAV HDGGDHFILV GRVLKAIFEP RRDPLLYFRG KYRKLHFA
|
|---|
| |