| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0883 |
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| Symbol | |
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| ID | 4082673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 888982 |
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| End bp | 889776 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638009244 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_615934 |
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| Protein GI | 103486373 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTTG GCATCGCGGG CAAGGTGGCG CTCGTCTTTG GCGGCTCGAA GGGAATCGGC
CTCGGTTGCG CGCATGAATT TGCGCGGGAA GGCTGCCGCG TCGTGATTGC CGCCCGCACC
CAGGCGACGA TCGACGCCGC CGTCGCCGAA GTGCAGGCGA CGGGCGGTCA GGCGATCGGA
GTGTCGGCAG ATTGCACGAC GAAAGATGGG ATAGGGCGGG CGGTGCAGGC GGCGACCGAT
GCGTTCGCCC CGCCCGACAT CCTGATCTTC AACGTCGATT CCGGTCCGAA GGGAAGTTTT
CTCGAAGTCG ATGACGATAT CTTTGCCGCC GCCAATACCA ACAATGTCAT GGCGTTCCGC
TGGGCGGTGC AGGCGGTGTA TCCGTATATG CAGTCGCGCC AATGGGGACG CATCCTGACC
ATCGGCACCA ACTCGGTAAA AGCGCCCCAT CGCAAGCTCC CGCGCGCCGC CCAGAACACA
TATCGCGTCG GTGCGCTGGC GCTGTCGAAA ACCCTGTCGG CCGAACTCGG CCCCTTTGGC
ATCACCGTGA ACACGCTGGG AACCGGTGCA ATCGCGACGC CGCAGTTCAA GGAGGTATTC
ACCAGGATCG CCGAAAAGCA TGGCCAAAGC TACGACGAAC ATATCGCCGA ACGAACGAGC
CAATACCCGA TCCCGCGCAT GGGGACGCCG GAGGATATGG CGGCGGCAGC CGCTTTTCTG
TGTTCCGACC GGGCGGGTTT CATCACCGGC CAGGTGCTGG TCGTCGATGG CGGCAATCTG
GAAGTTCTGC AATAA
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| Protein sequence | MDLGIAGKVA LVFGGSKGIG LGCAHEFARE GCRVVIAART QATIDAAVAE VQATGGQAIG
VSADCTTKDG IGRAVQAATD AFAPPDILIF NVDSGPKGSF LEVDDDIFAA ANTNNVMAFR
WAVQAVYPYM QSRQWGRILT IGTNSVKAPH RKLPRAAQNT YRVGALALSK TLSAELGPFG
ITVNTLGTGA IATPQFKEVF TRIAEKHGQS YDEHIAERTS QYPIPRMGTP EDMAAAAAFL
CSDRAGFITG QVLVVDGGNL EVLQ
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