| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0853 |
|---|
| Symbol | |
|---|
| ID | 4079989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 860647 |
|---|
| End bp | 861444 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638009214 |
|---|
| Product | enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_615904 |
|---|
| Protein GI | 103486343 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGAAC CCGACCATAT TCGCATCGAA CGCCGCGAGC ATGGAATCGC AGCCGTTGTG
GTGGATCGCG CCGACATCGG CAATGCCTCC TCGCCCGAAA TGCTGGGCGA AATTCGCGAC
GCTTTTACGG CGCTTTCGGC CGACCGGGAG GTTCGCGCGA TCATCCTCGC GGCCGAGGGA
AAGCATTTTT CGGTCGGGGC CGATTTTGCC TTTCTGGGGC GCCTGACCAG CATGGCAGCG
ACCGAGATCA AGGACACGGT TTACGCCAAT TTCCAGGGCG CCGCGCGCGC CATCTATCGT
TCGCCCAAAC CGACGCTCGC CGTGGTTCAG GGCGCCGCCG TCACTGTGGG GTGCGAGCTT
GCGCTCGCCT GCGATTTTCG GATCGCCGCC GACAATGCGA TGTTCCAGGA AAGCTGGATC
AAGCTGGGCA TCATGCCCCC GCTTGGCGGA ACTTTCCTGC TGCCCCGCAT CGTCGGGCTG
GGCCGCGCGA TGGATATGTG CCTGCGCGGT CGGCAGGTGC GCGCCGAAGA GGCCTTGGCC
ATCGGACTGG TCGCCGAGGT GGTGGCAAGG GACGATCTGG GGGAACGCGG CATGGCGTTG
GCGCGCGAAC TGGCTGCCGC CGCTCCGCTG GGCTATGCGA CGGTGAAGCA GTCGCTTCAA
CGCGCGCTCG AAAGCAGCAT GGACGCGGAA TGGCAGGCGA ATCTGTCCAA CCAGGCGTTG
CTGCTTGGCA GCGAAGATCA TCGCGAGGGG CTGGCGGCTG TAACCGAAAA GCGCGCGCCG
CGTTTTCGCG GCGCATAG
|
|---|
| Protein sequence | MAEPDHIRIE RREHGIAAVV VDRADIGNAS SPEMLGEIRD AFTALSADRE VRAIILAAEG
KHFSVGADFA FLGRLTSMAA TEIKDTVYAN FQGAARAIYR SPKPTLAVVQ GAAVTVGCEL
ALACDFRIAA DNAMFQESWI KLGIMPPLGG TFLLPRIVGL GRAMDMCLRG RQVRAEEALA
IGLVAEVVAR DDLGERGMAL ARELAAAAPL GYATVKQSLQ RALESSMDAE WQANLSNQAL
LLGSEDHREG LAAVTEKRAP RFRGA
|
|---|
| |