| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0810 |
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| Symbol | |
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| ID | 4080360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 815749 |
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| End bp | 817083 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638009171 |
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| Product | homoserine dehydrogenase |
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| Protein accession | YP_615863 |
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| Protein GI | 103486302 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0112934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCCT ATGCCACCCC GACCGCTCCC CGCCCGCCGC TCCGCGTCGC GCTTGCCGGG
ATCGGCGTCG TCGGCGGCGG GGTGGTAAGG CTGCTCGAGG CGAACCGCGC CCTGATCGCG
CGGCGCGCGG GTCGGCCGAT CGAGATTGTC GCGGTGTCTG CGCGCGACCG GCACAAGGAT
CGCGGCGTCG ACCTGTCGCG CTATCGCTGG GAAGACGATA TGGACGCGCT CGTCGCGGCG
GGCGATGTCG ATGTCGTCGT CGAGATGATC GGCGGCGCCG ACGGATCGGC GCTGACGCTG
GCGCGCCGCG CGCTGGGCGC GGGCAAGGCG CTGGTCACAG CGAACAAGGC GATGATCGCG
CATCACGGGA TCGATCTCGC CCGGATCGCC GAAGAAAAGG ACACGCCGCT GAAATACGAA
GCCGCTGTCG CGGGCGGCAT CCCTGTCATC AAGGCGATCC GCGAAGGCGC GTCGGCGAAC
GAGATCGCGC GCGTCTATGG CATCCTCAAC GGCACCTGCA ATTATATCCT GACGCAAATG
GAACGGAATG GCGCGAGCTT CGCCGATGCG CTGGCCGCCG CGCAGGCCGA GGGCTATGCC
GAGGCCGACC CGAGCTTCGA TGTCGATGGC ATCGACGCCG CGCACAAGCT GTCGATTCTC
GCCGCGCTCT GTTTCGGGAC GCGGCTCGAC ATCGGCGCGG TGACTGCCGA CGGCATCCGG
GGCCTGATCG CGGCCGACAT CCGCGAGGCC GAGGCGCTGG GGCACCGCGT CCGCCTGATC
GGCATGGCCG AGCGCGACAG CGCCGGGAAC GGCGGCGCCC TCTATCAGCA TGTCCAGCCG
TGCCTGGTGC CCGCCGACCA TCCGCTCGCC TATGTGCCCG GCGCGCTGAA CGCCGTGGTC
GCCGAGGGCA ATTTTGTCGG CCGCCTGTTC TTCGAGGGCG CCGGCGCCGG GGCAGGACCG
ACCGCTTCGG CGATCGTGGC CGACATCATC GACATCGCGC GCGACGAATA TGGCCCGGCC
TTCGCGATGC CGGTCGATGC ACTCGACGCG GCGCCCGCCG CCGATGCCGG CGCGCGCGTC
GGCAAACATT ATGTCCGCCT GATCGTCGAG GACCGGATCG GCGTGCTCGC CGAGATCGCG
GCGGCGATGC GCGACGCCGG CGTGTCGATC GAAAGCCTGA TCCAGCGCGG CAGCGAAGAC
GGTGACGACG GCGTCGTCAT CGTGCTCGTC ACCCATGAAG GCCCGGCAAG CGCGATCCAT
GCGGCGCTCG CGATTCTGGC GGGGTCGGAC CATGTCGTCG GCGCGCCGAT GCTGATGCCG
ATCCTGGCGC TCTAA
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| Protein sequence | MSPYATPTAP RPPLRVALAG IGVVGGGVVR LLEANRALIA RRAGRPIEIV AVSARDRHKD
RGVDLSRYRW EDDMDALVAA GDVDVVVEMI GGADGSALTL ARRALGAGKA LVTANKAMIA
HHGIDLARIA EEKDTPLKYE AAVAGGIPVI KAIREGASAN EIARVYGILN GTCNYILTQM
ERNGASFADA LAAAQAEGYA EADPSFDVDG IDAAHKLSIL AALCFGTRLD IGAVTADGIR
GLIAADIREA EALGHRVRLI GMAERDSAGN GGALYQHVQP CLVPADHPLA YVPGALNAVV
AEGNFVGRLF FEGAGAGAGP TASAIVADII DIARDEYGPA FAMPVDALDA APAADAGARV
GKHYVRLIVE DRIGVLAEIA AAMRDAGVSI ESLIQRGSED GDDGVVIVLV THEGPASAIH
AALAILAGSD HVVGAPMLMP ILAL
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