Gene Sala_0781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0781 
Symbol 
ID4080424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp787380 
End bp788567 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content68% 
IMG OID638009140 
ProductAcetyl-CoA C-acetyltransferase 
Protein accessionYP_615834 
Protein GI103486273 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CCGATCCCGT CGTTTTCCTC TCCTATGCGC GCACCCCGAT GGGCAGCATG 
CAAGGCAGCC TGTCGGATGC GAGCGCGACC GACCTCGGCG CGACCGCGGT GAAGGCGGCG
GTCGAGCGCG CAGGCGTCAG CGGCGACGAC ATCGAGCGCA TCTATATGGG CTGCGTCCTC
CCCGCCGGGC TGGGTCAGGC GCCCGCGCGC CAGGCCGCGA TCAAGGCAGG CCTGCCCAAA
TCGGTGCAGG CGACGACCGT GAACAAGGTC TGCGGTTCGG GGATGCAAAC GGTCATCATG
GGCGCCGAAG CGCTCGCCGC GGGCAGCGTC GAGTTGATCG TCGCGGGTGG CATGGAGTCG
ATGACCAATG CACCCTATCT GCTCAAGAAG CATCGCTCGG GCGCGCGCAT CGGCCACGAT
ACGGCCTATG ACCATATGTT CCTCGACGGG CTGGAGGACG CCTATGACGC GGGCCGCGCA
ATGGGCACCT TTGCGCAGGA CACCGCCGAC GCCTATCAGC TCAGCCGCCA GGCGATGGAC
GATTACACGC TGACGTCGCT GAGCCGCGCC AAGGCCGCGA TCGCCGAAGG CGCCTTCGTC
GCCGAAATCG CCCCGGTGAC GATTTCGGGC CGCAGGGGCG ACGTCGTCGT CGACACCGAC
GAAGCGCCGG GCAAGGCGAT GCCCGACAAG ATCCCGACGC TCAAGCCCGC CTTTGCCAAG
GACGGTACGA TCACCGCGGC GACCAGTTCG TCGATTTCGG ACGGCGCCGC CGCGGTCGTG
CTGACGCGCC AGTCGGTCGC CGACGCCAAG GGCGCAAAGC CCGTCGCGCG GCTCGTCGCG
CACGCCGCGC ACGCCCAGGA GCCCAAGGAT TTCACCGTCG CCCCCGTCGG TGCGATCAAC
AAGCTGCTCG CCAGGACTGG CTGGTCGATC GGCGACGTCG ACCTGTTCGA GGTCAATGAA
GCGTTCGCGT GTGTGGCGAT GTTCGCGATG CACGACCTGG GCATTCCGCA CGACAAGATC
AACGTCCACG GCGGCGCGAC CGCGCTCGGT CATCCGATCG GCGCCAGCGG CACGCGCATC
ATCACCACGC TGATCGCGGC GCTGCAACGC CACGGCAAAA AACGCGGCAT CGCCAGCCTG
TGCATCGGCG GCGGCGAAGC GACCGCGGTG GCGATCGAGC TGGTGTAA
 
Protein sequence
MTATDPVVFL SYARTPMGSM QGSLSDASAT DLGATAVKAA VERAGVSGDD IERIYMGCVL 
PAGLGQAPAR QAAIKAGLPK SVQATTVNKV CGSGMQTVIM GAEALAAGSV ELIVAGGMES
MTNAPYLLKK HRSGARIGHD TAYDHMFLDG LEDAYDAGRA MGTFAQDTAD AYQLSRQAMD
DYTLTSLSRA KAAIAEGAFV AEIAPVTISG RRGDVVVDTD EAPGKAMPDK IPTLKPAFAK
DGTITAATSS SISDGAAAVV LTRQSVADAK GAKPVARLVA HAAHAQEPKD FTVAPVGAIN
KLLARTGWSI GDVDLFEVNE AFACVAMFAM HDLGIPHDKI NVHGGATALG HPIGASGTRI
ITTLIAALQR HGKKRGIASL CIGGGEATAV AIELV