| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0672 |
|---|
| Symbol | |
|---|
| ID | 4082969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 681462 |
|---|
| End bp | 681977 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638009031 |
|---|
| Product | acetyltransferase |
|---|
| Protein accession | YP_615726 |
|---|
| Protein GI | 103486165 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1247] Sortase and related acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.722792 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.323144 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTG CAGTTCGCCC CGCCACCTCG GATGACGCAC CCGAACTTGC CGCGCTGATC
AACGCCATCA TTGCGCGCGG GGGAACCACC GCGCTGGAAA CCCCTTTCAC GCCCGATCAG
CTTGACGCTG CGTTCCTCAC CGGGCCGGAC GTGTGGTGTT GCTTTGTAGC CGTCGGTCCG
GAAGGCTGTC TGGAAGGATT CCAGACGTTG CTTCGCGAGG ATGGCTATCC GGCGGATTGG
GGCGACATTG GCACCTTCAC GCGGATCGAC GGGATACAGA AGGGTGTCGG CACAGCGCTG
TTTGCCGCCA CGCGGGCGCG CGCAAGCGAA CTCGGTCTCG CCGCGATCAA CGCGACGATT
CGTGCGGACA ATAAGGGCGG ACTTACCTTC TATTCGAAAA TGGGAATGGA AGATTATGCT
GTTGATCGGG GGCAACAGCT CGCCGACGGC ACAGCTGTCG ACCGCATTCA CAAACGCTAT
TTTCTGAAAA TCGATGGACA TGATGCTGAA AATTGA
|
|---|
| Protein sequence | MSIAVRPATS DDAPELAALI NAIIARGGTT ALETPFTPDQ LDAAFLTGPD VWCCFVAVGP
EGCLEGFQTL LREDGYPADW GDIGTFTRID GIQKGVGTAL FAATRARASE LGLAAINATI
RADNKGGLTF YSKMGMEDYA VDRGQQLADG TAVDRIHKRY FLKIDGHDAE N
|
|---|
| |