Gene Sala_0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0633 
Symbol 
ID4082569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp643328 
End bp643672 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content63% 
IMG OID638008992 
ProductHxlR family transcriptional regulator 
Protein accessionYP_615687 
Protein GI103486126 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.437406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGC TGGTTTCACG CTGTCCGATC GAGGAGGTGA TGCAGCTACT GGGCGGCCGC 
TGGCCCAGCC TGCTGATCTA TTATCTCAGC GACGGGACCA AGCGGTTCAG CGACCTGCAA
CGCGACAATC CGACGATCTC GCACAAGATG CTGACGCTCG AACTGCGCAA GCTCGAGGAT
GCGGGGATCG TTCGCCGCAC TGACTTCGAC GGCTATCCGC GCCGCGTCGA ATATGGCCTG
ACCGAGGATG GCGAAAGGCT GGTGCCGCTG ATCGACGCGC TTGGCGACTG GTGGGGTTCG
ATGGTTGCCG CACCAGCGGA CGCGACCGTG GTCGCCGCGG ACTAG
 
Protein sequence
MKELVSRCPI EEVMQLLGGR WPSLLIYYLS DGTKRFSDLQ RDNPTISHKM LTLELRKLED 
AGIVRRTDFD GYPRRVEYGL TEDGERLVPL IDALGDWWGS MVAAPADATV VAAD