| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0622 |
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| Symbol | |
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| ID | 4082558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 633209 |
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| End bp | 634102 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638008981 |
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| Product | prephenate dehydratase |
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| Protein accession | YP_615676 |
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| Protein GI | 103486115 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0077] Prephenate dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.284363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.610727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGTT ATTCGGCTTC GGCGCAGCAT CTGGTCGACA AAATGCGGGC GCTGGCCCTG
GCCGAACCCG CGCGCGGGCT GGCGTTCCAG GGCGCGCCTG GCGCGAACAG CGACCTCGCC
GCGCGCGAAT ATGACCCGAA CTCGCTGCCG CTGCCCTGCT ATGCCTTCGA GGATGCGATC
GATGCGGTGC GCGAAGGCCT GGTCGACCGC GCGATCATTC CGATCGAGAA CAGCCTGCAT
GGCCGGGTCG CCGACATTCA TTTCCTGCTC CCCGAATCCG GCCTGTCGAT TGTCGGCGAA
CATTTCCTGC CGATCCGCTA TGGGTTGATG AGCCGCAATC TGGGACCGGT GACGCGCGCG
ATGAGCCACG AACAGGCGCT CGGCCAGTGC CGCAAATGGT TGCGCGCCAA TAATATCGCG
CCCGTCGCGC ACAGCGACAC CGCGGGCGCC GCCGCCTGGG TTGCCGACAG CGACGAGGTC
GGGCTCGCCG CACTGGCGCC GCCGCACGCC GCCGACCTCT ATGGCCTGAC GCTGCACGGC
ACGGGAATGG AGGACGCCGA TCATAATATG ACGCGCTTCG TCGTGCTCGC GCGCGAGCCC
TTGCGCGATC TTTCGGCAGT CGAAGGGCCG GTGATGACGA CCTTCATGTT CGAGGTGAAG
AATATCCCCG CTGCGCTCTA CAAGGCGCTC GGCGGCTTTG CGACCAACGG CGTCAACATG
ACCAAGCTCG AAAGCTATCA GACGGGCGGC AGCTTTGCCG CGACCAAATT TTACGCCGAC
ATCGTCGGCG CGCCGGGCGA CGAACGTGTC GACCGCGCGC TGGAGGAGCT GGATTTCCAG
ACCAAGTCGC TGCGCCTGCT CGGCACTTAT CCGCAGGCGC GCCCGCGTCC CTGA
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| Protein sequence | MGSYSASAQH LVDKMRALAL AEPARGLAFQ GAPGANSDLA AREYDPNSLP LPCYAFEDAI
DAVREGLVDR AIIPIENSLH GRVADIHFLL PESGLSIVGE HFLPIRYGLM SRNLGPVTRA
MSHEQALGQC RKWLRANNIA PVAHSDTAGA AAWVADSDEV GLAALAPPHA ADLYGLTLHG
TGMEDADHNM TRFVVLAREP LRDLSAVEGP VMTTFMFEVK NIPAALYKAL GGFATNGVNM
TKLESYQTGG SFAATKFYAD IVGAPGDERV DRALEELDFQ TKSLRLLGTY PQARPRP
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