Gene Sala_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0552 
Symbol 
ID4081442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand+ 
Start bp567044 
End bp567664 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID638008910 
ProductABC transporter related 
Protein accessionYP_615606 
Protein GI103486045 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4148] ABC-type molybdate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.145284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.110356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTG AGATCGACGT CGAAAAACGA CGTGGCGACC GCGTCATCGC CGCGCGCTTC 
TCAGCGGGGC CGGGGCTGAC CGCGCTGTTC GGCCCGTCGG GTGTGGGCAA GACGAGCATA 
TTCGACATGG TCGCCGGGCT GCTGCGCCCT GATCGCGGGC ATATCCGCAT CGGCGACCGT 
ATTTTATTCG ATGCCGAGAC CGATCTGCCG CCCGAAGCGC GCCGCATCGG TTATGTCTTT 
CAGGACGGGC GACTGTTCCC GCACAGGCGG GTGCGCGCGA ATCTTCTCTA CGGCCACGCG 
CTTGCGCCGC AGGCGAACCG CTGGATGACG CTCGAAGAGG CGGCCGGCTT CCTCGGCATC 
GGCCATCTTT TCGACCGCTG GCCGCAAAGC CTGTCGGGCG GGGAGGCGCA GCGCGTCGCG 
ATCGGTCGCG CGCTGCTCGC CGGTCCCGAC ATATTGCTGA TGGACGAACC GCTCTCGTCA 
CTCGACGCGG CGCGGCGCGG CGACATCATG GCGGTGATCG AGCGGATTCG CGACGAGCTT 
CGGCTCCCCA TTCTCTACGT CAGCCACGAT CACGCCGAGG TCGACCGGCT CGCAACATCG 
GTCGTCGCGA TCGGCGAATA A
 
Protein sequence
MTIEIDVEKR RGDRVIAARF SAGPGLTALF GPSGVGKTSI FDMVAGLLRP DRGHIRIGDR 
ILFDAETDLP PEARRIGYVF QDGRLFPHRR VRANLLYGHA LAPQANRWMT LEEAAGFLGI 
GHLFDRWPQS LSGGEAQRVA IGRALLAGPD ILLMDEPLSS LDAARRGDIM AVIERIRDEL 
RLPILYVSHD HAEVDRLATS VVAIGE