Gene Sala_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0528 
Symbol 
ID4081418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp543258 
End bp543974 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content65% 
IMG OID638008886 
ProductSerine O-acetyltransferase 
Protein accessionYP_615582 
Protein GI103486021 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.289096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACG GGCTGATCGC CTATCTCGAT TCGATCAAGG CGCGCGACCC CGCGCCGCGG 
TCGCGCTGGG AAATCCTGCT CTATCCGGGG CTGCTCGCGG TCGGATTGCA CCGCATCGCC
CACTGGCTGT TCGAGGCGCG TCTGTTTTTC CTCGCGCGCT TCGTCAATCA CCTGTCGCGC
TTCCTGACGG CGATCGACAT CCATCCCGGC GCGAAGATCG GCCGTCACCT CTTCATCGAC
CACGGCTTCA CCGTCATCGG CGAAACCGCC GAGATCGGCG ACAATGTGAC CATTTACCAA
TGCGTGACGC TGGGCGGCAC CGATCCCGCC AACGGCATTG CGGGCAAACG TCATCCGACA
CTGGCCGACG ATGTCATCGT CGGATCGGGC GCGCAGATAT TGGGGCCGAT CACGGTCAAC
GCGCGCGCGC GCGTCGGCGC CAATGCGGTG GTGACCAAGG ACGTGCCCGA AGGTGCGGTG
ATGGTGGGCA TCCCGGCGCG TTCGACCCTG GTCGATGCCG CCGAATATGC GCGCGAGTTC
GTGCCTTATG GCACGCCGTG CAGCGAGATT TTCGATCCCG CGACGCAAAA GGTCGAACTG
CTGCAATGCC AGCTCGAACA GATGCAGAAA CAGCTCGCGG CGCTGATCGC CCAGCGCGAC
GTGGCGGAAG CTGACGAAGA GGCGCCGCGG CGCAAGGGAG GGCGTAAGAG CGCCTGA
 
Protein sequence
MFNGLIAYLD SIKARDPAPR SRWEILLYPG LLAVGLHRIA HWLFEARLFF LARFVNHLSR 
FLTAIDIHPG AKIGRHLFID HGFTVIGETA EIGDNVTIYQ CVTLGGTDPA NGIAGKRHPT
LADDVIVGSG AQILGPITVN ARARVGANAV VTKDVPEGAV MVGIPARSTL VDAAEYAREF
VPYGTPCSEI FDPATQKVEL LQCQLEQMQK QLAALIAQRD VAEADEEAPR RKGGRKSA