| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0443 |
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| Symbol | |
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| ID | 4082990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 453990 |
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| End bp | 454646 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008800 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_615497 |
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| Protein GI | 103485936 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.270121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCA AAACTCTCTT GATCGCAGGC ATCGCGATCA CCTCTGCTAT CCCGGCCAGT
GCCCAGGAGT TGCCAACGCC AGCAACAATC GAAGCAACCG CCAGCCACTC CGACGGCATT
CGGATTGCTA AAACATCGAA TGGCTTCCAG CTGGTCGAGC ATGGGCTCTG GCGATCTGCC
CAAGACGGCC CGGCGCCTGT TGTGACTGTG CCGCGAACTG GTCGGGTCAA CCTGCCCTAC
AGATACGAGC GGAATCCCCA ACCTGGCCCA TCCGGCTTCA GGCGAGCAAG CTACCTTCCC
CACATCTATG CGGCAGAAGC GAAGTACTCA TTGCCCGCGG GCCTGCTCGA TGCGCTCGTT
TGGACGGAAT CTCGCTACAA CCCTTTGGCG GTCAGTCCGG CGGGTGCCGC GGGCCTTGGG
CAGCTGATGC CCGCAACGGC AAAGGAACTC GGGGTCTTCA ACCGATTTGA CCCCATGGCT
AACATCTTCG GCGCTGCGCG GTATCTCCGG CAGATGCTCG ACAGGTTTGG CGTGGTTCAC
CTTGCGGTCG CTGCCTACAA TGCCGGTCCA AGGGCAGTTG AACGCGCAGG TGGCATTCCC
CGCAATGGCG AAACACCCGG ATATGTCCGC GACGTCCTGC GGCACTGGCA GTTTTAG
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| Protein sequence | MTIKTLLIAG IAITSAIPAS AQELPTPATI EATASHSDGI RIAKTSNGFQ LVEHGLWRSA
QDGPAPVVTV PRTGRVNLPY RYERNPQPGP SGFRRASYLP HIYAAEAKYS LPAGLLDALV
WTESRYNPLA VSPAGAAGLG QLMPATAKEL GVFNRFDPMA NIFGAARYLR QMLDRFGVVH
LAVAAYNAGP RAVERAGGIP RNGETPGYVR DVLRHWQF
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