Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0350 |
Symbol | |
ID | 4081048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 355082 |
End bp | 361354 |
Gene Length | 6273 bp |
Protein Length | 2090 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638008709 |
Product | hypothetical protein |
Protein accession | YP_615406 |
Protein GI | 103485845 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.279017 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCTTG CATCGAGGAC GACCGCCATG CGTGCCATCG CCACCCCCTC GCCCCGCCAT CGCGGCAAGC CGCGCCTGCT GGCCAGTTGC GCGATTGCCG CAGGTCTGGC CGCGCTCGCA CAGGGCGGCC CGGTCGCGGC TCAGGTCGCC GGAACCGGCA GCTTTGTGTC GGGCACCGGC GCCATCGGCA ACAATGGCGC CACCAACACG ACAAGCGTTA CGGTGACGAC GAGCGAGAGC GTCATCAACT GGGTGCCTAC CGACAATGCG CCGACCGGCG GTGCGATCGA TATCCTTCCG GCCGGCGAGA TATGGAACTT CATCGGCACG GGCGACTATA CGGTGCTCAA CCGCTTCGTC GACGCATCGG GTGGCGCGCT CGGCCGCCAG ATCGCGCTCA ACGGCACGGT CAATTCCTAT ATCGGCTCGA CCACCGGCCC GCGCGGCGGC AATATCTGGT TCTATAACGC CGGCGGCGTG TTGATCGGCG CCAGCGGCGT CATCAATGTC GGCAGCCTGT TGCTGACCGC CAACGACGTC GACACGAGCG GCGGGCTGTT CGGTCCCGGC GGCACGATCC GCCTGGGCGG CGCGTCGGGA AGCACGTCCG CGATCACCGT CAATGGCGCG ATCAACGCCA ATAACGCGGG CAATCCGGGC AGTTCCTATG TCGCGCTTGT CGCGCCGCGC ATCGTGCAGG CGGGCACTGT GCGCGTCGAT GGTTCGGCCG CCTATATCGC CGCAGAGGCG GCGAATATCC GCATCAACGG CGGCCTTTTC GACATCGACG TCACCGTCGG TGCAGAGGGC GGCACGGTCA TCGACCACTC GGGCACGACG ACCGGCCCCG CGCACCAGCA GGGCGACACC GACCAGAGCC GCATCTATAT GGTGGCGATC CCCAAGAACG ACGCGGTGAC GCTGCTGGTC GGCGGCGCGA TCGGCTATGA CGACGCCGTC TCGGCGCAGG TCGATCCCGA TGGCGCCGTG CGGCTGTCGG CGGGATATAA TATCGTCGGG GGCGAGCTGG ACACCGCGCC GGTCAGCGCC GTCGCCGCGA CCATCGTCGC CGCCGACACG CTCTTCCGCA GCGACACGGT GGCGCGCGCC AGCGGCACCT TCGCGGCCGC CCCGACGCAG ACGCTGCCCG GATCGCCGCC GGCGCTGTCG GCCGATGGCC AGTTCCTTGT CGAGGGCAAT GGCAGCTTCA CCGGCGATGC CGGCGCATCG CTGATCATCG GCGCGGGCCA GCAGGGCGGC GCAACCGGCA ACTTCACCCT CCAGTCGGGC GGCACGGCTG GCGCCGTCGG CAATGCCGCG CTGACCGTGA CGGGCGGGAC ATTCGCGGCA AGCGACCTTG CGATCCTGGC GTCGGGCACG CCCGAAGCAG TGACGGGCGA CGCACAGGGC GGCAATGCCA GCCTGACGAT CGCCGGGGGC AGCGTGACGA CGTCGGTGCT CACGATCGAC GCCAGCGGCG TTGGGGAGAT CGGCGATGGC GGCACGGCCG GGGCCGGACG GGGCGGCAAC GCCACTTTCT CGCAGACCGG CGGCACGGCC TCGATCGGCG ACATCCGGGT CAGCGCCGAC GGTGGCGCGG TGGAGAGTCA ATCGGGACTT GGCGTGGGCG GAAACGCGAC CATCGACTTC AGCGGCGGAT CGATCACCGT CGCGGACGTC TTCGCGACCG CCGACGGCTT TGGCGGCGAA GGCCTGCCGG GCAATGACGA TGATCCCCTG AACATCATCC CCGGCGGCGA CGGCCAGCAG GGACGCGGCG GCACCGCGAC GATCAACATT TCGGGCACTG CGGTCGTCGA TGCCAGCGTC ATCCAGGCGA GCGCGGTCGG TACCGGCGGG CGCGGCGGCG AATTTTTCAA CTTTTCAAGC TTCAGCGGCG TGCCCGGCAC ACCGGGCGAC GGCGCCGAGG GGATCGGCGG CACGGCCGCG ATCAACGTTA CCGGCGGCAC CACGACCGCG AGCAGCATGA TCGCCGATGC CTCCGGGATC GGCGGCGACG GCGGCGGCAG CTTCTTTTCG AGCAGCAGCG GCGGCGCGAC GGGTATCGGG GTCGGCGGCA CGGGCGGCGC CGGGCGCGGC GGCAGTGCGA CGATCGCGCT CGAAACGGCG ATCCCCGCGG TCGCTTCGGC CAGCAGCGTC GCGACAGGAA CGGGCGGCGA CGGCGGCATC CACAACGTCG GCGGCGCTGG CGGGGATGGC TTCGGCGGCG TGGCGCAAGC AATCGTCACC GGGTTCGATG CAGGCGCGCT GCTGATCGCC ATCGCATCGA CCGGCACGGG CGGCGACGGC GGCAACGGGC GCGATGGCGA CGGCGGCGAC GGCGGCAACG GCAGCGGCGG CACCTCGCGG ATGCAGGCGG TGGGCGCCGG TGCGGGTCTC ACCATCGTCG AAACCAACTT CGTCACCGGC GGGGTCGGCG GCAACGGCGG ATCGGCCGGG CTCGGCTTCG GCTCCTTCCC CACTGCCGCC CCGGACGGCG GCGACGGCGG TGACGGCCGC GGCGGCACGA TAGAGATCGC CGCCACGGAC GGCGCGGCGG TGACGCTCGG CACCGGCACC GGCGGCGGCG TCGCGCTCGC CAGCAGCGGC GCCGGCGGCG CCGGCGGCGC GGGAGCAAAC AGCGTCTTCG GGGCCGGAAA CCAGGCGGGC GATGGCGGCG ACGGGGGCAA TGGCGGCGGC GGGACCGTCC GACTGGTCGC GGTCGGTGGC ACGATCGATT CGGGGGGTGA GGCCGTCGAT CTTGCCGCAA ATGGCGTCGA GGGCGAAGGC GGCAGCGGCG GACTCGGCCA GGGCGGCGGC ACCGATGGCG GCCTTGGCCT CATGGGCCTG TCGGCGGGCG GACGCGTCGA GATCGAAGCG CGCAGCGGTG TCGCGGGACC CGGCCAGATC GACCTCGGGC AGACGGGCAT CGATGCCAGC GGCGACATCG CAGGCCGTAT CGAATTGCGC ACCAGCGGCG GCGACATCAA TTTCGCGGGC CTCGCCGCGC AGGCGTTCGG CCTCGCCGCG CCGACGAACA ACGACATCGA CACTGCGGCC GCGGGCATTT TCGTCGCTCC AGCGGGCGGC GCGATCGCCA GCCAGGGCGA CGTCACGCTC ATCACCGACG GATCGATCGG CGTCTATGGC CAGTCGAATG GGAGTTTCGA CGTCGACGGA TCGCTGACGA TCGACGCGGG CGACCAGATC GACCTGCGCC ACGACAATCG CGAAGGCACG GCACCGACGC TGAACGCGAG CGGCGACATG ACGATGACGG CGGCGACCAG CGTCAGCGGC GCGACGGGCA GCCTCGCCGC CGCCGATGGC TCGCTGTCGC TGACGGTCAG CGATCCCGCG GGCACGATCA TGGTCGACGG GCTGGCGGGC GGAAGCATCA GCCTCTTCAG TCCCGGCGCA GCCAGGGTCG AACATGCCGA AGCGATTGGC GATTTCAGCG CCAGCGCAGG CAGCTTCGCC ACCGGGCTCA ACTCGATCAT CACCGGCGGC AATATCAGCA TCGCCTCGCC GGGCGCGGTC GACCTCGGCA ATTCGAGCGC CGGCGGATTC GTGCAGGTGT CGGGCCAGTC GATCGCGTTC AACAGCATCG ATGCCGGGCT GACGGTCAGC CTGTCGGCGG TGGACGGCAT CGACGGCGGC GCGATCGCCG CGACCGGCGA CATCAGCCTG TTCGCCGACA ACGTTGCGCT GACCGGCCCG GTCACCGGCG ACGCATCCTT TGTCGCCTTC GGCCTTGGCG GCGCGGTGTC GGTGGATACG GCCGATGTCG CGGGCACGAT CTCGATTTTC GCCGCCGACG ATTTGACGGG CAATTTCGTC GCGGGCGGCA ACATCTTCCT CAATTCCGAT GCCAGTATCT TTGCTTCGGC GATCGCCAGC GGCGGCTATG TCGATGGCAA CGGCCTGCTC GCAGAGGGCA ATCTGTTCGC CATTGCGGCC GCCGACGTCT CGCTGACGAC CAGTGCCGCC GCGCGCATGT TCGGCGTCAG CGCGGGCGGC GCCGCGTCGG TCGACGGCGG CACCGCGGGC GAAGATATGC TGCTGCTCGC GGGAACCATC GCCAGTCTCG CCAATATCGC CGCGGGCGAC GATGTCAGGG TGCAGGCCGC GGGCAATGTC TTCGCCAACG GTGTCGCCGC GACCGGCGCG GGCGCCGATA CACATATCCT CGACTTTTCT TCGGCATCGG GCAGTCCCGG TTTCGCGATC ACCCCACAGG CCGCGGACGG CGCCGACATC GTCATGCAGT CCGCCGCGGG CGCAATCGAC GCTGCCGCGC TGACGGCAGG CGACGACATT CTGCTCACCG CCGCCAACGA GATCGCGGTG GGCGGCGCGT CCACGCTGGG CCTCGGCGTT ACCGGCGGCG ACAGCAGCCT CCGCACCCAG GGCGGCGCGA CGACGCTCGC CGACGTCGCA TCGTTCGACG ACGTTGTCGT CGACTCCGCC GGCCCCGCCA CCCTGACCGC CTCCGTAAAC GCTGGGCGCG ATATCGCGAT CACGGCCGAC AACGTCACGA TCGCCGCGCT CACCGATCCA GGTGGCAATC CGGCTCCGAC GCTCACCGCC GACGGCAACC TCGTCATCGC TTCGACTGCG GGCATCGCGG GCGGCGGCGT TCGCGCGCTC GGCAACGCAT CATTGAACGC GGCCGGCGCA ATCGACCTGA CCGTGGTGGA GGGGCAGAAT GTCGCGCTGA CGGGCGCCGC AGGAATCGAC GCCGACCAGG TCTATGCGCT TGGCGCGACG AGCCTTGCCA GCAGCAATGG TGCGATCCGT ATCGGCGCGC TTTTTGCCTC GGGACCGATC GACGCCAGCG CCGACGCGAT CCGCATTGAA GGCGGCGACG CGATGGACTT TGCGACGCTT GTCACCGACG TCGGCGACGC CTTTGTCCGC TCGAGTGGCG ATCTGTCGCT CGGCAACGGC TCCGTCGCCG GCACCGCCGA TCTCGACGCG CAGGGTACGG CGATGACGAT CGACGCGCTC ACCGCCGCCG ACGCGATCCT CGCGAACAAC GGCGGCGTCC TCAATCTCGG CACCGTAACC GTCGCGGGTG ATCTCAGCGC CACCGCGCGG TCGTCAATCG GCGTGGCGGG CATCGTCACA GGGCAGTCGA TTTCGTTCGC TTCGGCGGAC ATTGCGATCG ACGCCGCGGC GCGCATCGGC ACCGCGGGCG TCACTACGGC TCTCTCGCTC GCGAACAACA ACAACGCCAA CCAGACTTTC ATCGGCGGCG CGCCAGGGGG CAGTGTGTCG GGCTATCGTA TCGATGCCGA CGAACTCACC CGCCTGTTCG GCGCGCAGAT CGAGGTCTTC GCACCCGAAG TGGCTTCCGT GGGGGGCAGC TCGGTCGGGT CGGCAGCGCC GCCCGACGTC ATCATCGACA GTTTCACGCT GGCAGGTGGC GCCCCCGGAT CGAACCTCGG CGCCAATGGT GCGCTGACGA TCCGCACGCC GGGCAAGATG CGCGTGATCG GCAATGTCGA ACTCTCCGGG CTGACCGATG CCAATGCGCT CAATCTCGTC GCGGACGACG CGCTCGAGGT CATTCTTGGC CAGGGCAGGG TGCGCCTCGT CAACGGCACG GCACCGGCGG GTCAGCTCAA CATGGTGTCC GACGACATCA TCGTTGCAAC AGCGGCGGCG ATTGCCGACG TCGCCTCGGC GATGACGACC GACGCGATCA GCGAGCGGCT CAGCCGGAAT GACGGCATCG TCCTCGACGA AGGCGCACTC TTCGCGCGCG GTATCCGCGC CGCGGTCGTC GGCGGCTTCT TCGTCCAGAA CAGCGGCGCC GGAACGGCGC TCGCGGAGCG CCGCGGGTTC ACCTTCGGTG CGGGGGGGCT CGACGTCCTG ACTGAAGGCG CGTCGCGGAT CGTCGTCAAC GGCACGCATC TGGGTGCGGG CGGACGGGTC ACCGGGCTCC AGGCCCTTCA GCTGGTGACG GTCAACGGGG TCGCGCCCGT TGTCGGCAGT TATGACCCGC GATCGACGGT CAACGGCTGC CTCCTTTCCA GCCCGGCCGT TTGCATCGCA TTCGATCGCG ACGGCGATGG CGGATTTCCG GTTCAGGATG TGATCGAGGA AGAGATCGAG GGCGACGGGG AAGACGGACA GGGCGGCGGC TATACCCTGC GGCAGCCGCT GATCACGATG CGGGACATCG ATCCGCTGAG CGGCGAGCCG CTCGTCGACG ATCCGGTGAC CGGCGCGGGC AACGACGATC TGTGGACCCC GCCCGCGGAG TAA
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Protein sequence | MILASRTTAM RAIATPSPRH RGKPRLLASC AIAAGLAALA QGGPVAAQVA GTGSFVSGTG AIGNNGATNT TSVTVTTSES VINWVPTDNA PTGGAIDILP AGEIWNFIGT GDYTVLNRFV DASGGALGRQ IALNGTVNSY IGSTTGPRGG NIWFYNAGGV LIGASGVINV GSLLLTANDV DTSGGLFGPG GTIRLGGASG STSAITVNGA INANNAGNPG SSYVALVAPR IVQAGTVRVD GSAAYIAAEA ANIRINGGLF DIDVTVGAEG GTVIDHSGTT TGPAHQQGDT DQSRIYMVAI PKNDAVTLLV GGAIGYDDAV SAQVDPDGAV RLSAGYNIVG GELDTAPVSA VAATIVAADT LFRSDTVARA SGTFAAAPTQ TLPGSPPALS ADGQFLVEGN GSFTGDAGAS LIIGAGQQGG ATGNFTLQSG GTAGAVGNAA LTVTGGTFAA SDLAILASGT PEAVTGDAQG GNASLTIAGG SVTTSVLTID ASGVGEIGDG GTAGAGRGGN ATFSQTGGTA SIGDIRVSAD GGAVESQSGL GVGGNATIDF SGGSITVADV FATADGFGGE GLPGNDDDPL NIIPGGDGQQ GRGGTATINI SGTAVVDASV IQASAVGTGG RGGEFFNFSS FSGVPGTPGD GAEGIGGTAA INVTGGTTTA SSMIADASGI GGDGGGSFFS SSSGGATGIG VGGTGGAGRG GSATIALETA IPAVASASSV ATGTGGDGGI HNVGGAGGDG FGGVAQAIVT GFDAGALLIA IASTGTGGDG GNGRDGDGGD GGNGSGGTSR MQAVGAGAGL TIVETNFVTG GVGGNGGSAG LGFGSFPTAA PDGGDGGDGR GGTIEIAATD GAAVTLGTGT GGGVALASSG AGGAGGAGAN SVFGAGNQAG DGGDGGNGGG GTVRLVAVGG TIDSGGEAVD LAANGVEGEG GSGGLGQGGG TDGGLGLMGL SAGGRVEIEA RSGVAGPGQI DLGQTGIDAS GDIAGRIELR TSGGDINFAG LAAQAFGLAA PTNNDIDTAA AGIFVAPAGG AIASQGDVTL ITDGSIGVYG QSNGSFDVDG SLTIDAGDQI DLRHDNREGT APTLNASGDM TMTAATSVSG ATGSLAAADG SLSLTVSDPA GTIMVDGLAG GSISLFSPGA ARVEHAEAIG DFSASAGSFA TGLNSIITGG NISIASPGAV DLGNSSAGGF VQVSGQSIAF NSIDAGLTVS LSAVDGIDGG AIAATGDISL FADNVALTGP VTGDASFVAF GLGGAVSVDT ADVAGTISIF AADDLTGNFV AGGNIFLNSD ASIFASAIAS GGYVDGNGLL AEGNLFAIAA ADVSLTTSAA ARMFGVSAGG AASVDGGTAG EDMLLLAGTI ASLANIAAGD DVRVQAAGNV FANGVAATGA GADTHILDFS SASGSPGFAI TPQAADGADI VMQSAAGAID AAALTAGDDI LLTAANEIAV GGASTLGLGV TGGDSSLRTQ GGATTLADVA SFDDVVVDSA GPATLTASVN AGRDIAITAD NVTIAALTDP GGNPAPTLTA DGNLVIASTA GIAGGGVRAL GNASLNAAGA IDLTVVEGQN VALTGAAGID ADQVYALGAT SLASSNGAIR IGALFASGPI DASADAIRIE GGDAMDFATL VTDVGDAFVR SSGDLSLGNG SVAGTADLDA QGTAMTIDAL TAADAILANN GGVLNLGTVT VAGDLSATAR SSIGVAGIVT GQSISFASAD IAIDAAARIG TAGVTTALSL ANNNNANQTF IGGAPGGSVS GYRIDADELT RLFGAQIEVF APEVASVGGS SVGSAAPPDV IIDSFTLAGG APGSNLGANG ALTIRTPGKM RVIGNVELSG LTDANALNLV ADDALEVILG QGRVRLVNGT APAGQLNMVS DDIIVATAAA IADVASAMTT DAISERLSRN DGIVLDEGAL FARGIRAAVV GGFFVQNSGA GTALAERRGF TFGAGGLDVL TEGASRIVVN GTHLGAGGRV TGLQALQLVT VNGVAPVVGS YDPRSTVNGC LLSSPAVCIA FDRDGDGGFP VQDVIEEEIE GDGEDGQGGG YTLRQPLITM RDIDPLSGEP LVDDPVTGAG NDDLWTPPAE
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