Gene Sala_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0329 
Symbol 
ID4082360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp335181 
End bp336002 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content68% 
IMG OID638008688 
Producthypothetical protein 
Protein accessionYP_615385 
Protein GI103485824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.236548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGG CAGGTGCAGA TCGGGGGAAC GAGCGACGCG GTTTTGCCAT CGCGGTGGCC 
GCGCATGTCG TCATCATCGG CCTGCTCTCG ATCCAGTGGA CCGCGGGCGA GCGCCGCTTT
GACAATCCGC CGATGGAGGT CGACCTGATC GCCGAAACCG CGGTGCAATC GACCGCGCCG
GTCATCAGCG AGACGCCCCC CGCGGCGCGG CTGGGCGAAG AAGATAATGT CGATATCGCG
GCGCCCGAAC CGATGCCCGC GCCGCCGCTG CCTGAACCGG TCGTGCGGCC GACGCCCGCC
CCGACGCCCA AACAGGTCGC GCGACCCAAG GCGCAGCCCA AACAGACCCC GCCCGCCGCC
GTCAAGGCGC AGCCCAAGGC CGCCCCCAAG GCGCCGCCTG CGAAGGACCG CCCCGCGCGC
CCGACCGGCC GCCTCGACGG GATCGCCGAA GGGCTGTCGA AGTCGCAGCC CAAATCGCCA
TCGAGCAAGG GCGCGCCCGC CGCGGCGACC GCGGCCGAGG TGCGCCGCTC GATCGACGTC
AGCATCAAGG CCGCGGTTGC GCCGCGCTGG AACAGTTGCC GCGTGTCGGG CGTCGACGTC
GACCAGCTCA AGACCATCGT GAAGTTCCGC CTGACCCAGT CTGGCGCGCT GGCGGGATTC
ACCAGCGTGA CGACGACCGG CGAGAATGAC AGCAACCGTT TCCAGATTGA GCGGCATCAG
GAATGCGCCA AACGCGCGGT CGAACTTGCC GCGCCTTTCG ACCTGCCCGA AGAAAATTAC
AGCTTCTGGC AGAATTACAC GCTCGATTTC ATCAAGAGGT AA
 
Protein sequence
MAEAGADRGN ERRGFAIAVA AHVVIIGLLS IQWTAGERRF DNPPMEVDLI AETAVQSTAP 
VISETPPAAR LGEEDNVDIA APEPMPAPPL PEPVVRPTPA PTPKQVARPK AQPKQTPPAA
VKAQPKAAPK APPAKDRPAR PTGRLDGIAE GLSKSQPKSP SSKGAPAAAT AAEVRRSIDV
SIKAAVAPRW NSCRVSGVDV DQLKTIVKFR LTQSGALAGF TSVTTTGEND SNRFQIERHQ
ECAKRAVELA APFDLPEENY SFWQNYTLDF IKR