| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0292 |
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| Symbol | |
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| ID | 4082652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 290401 |
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| End bp | 291780 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638008650 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_615348 |
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| Protein GI | 103485787 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.247697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCA GCCTGTTCGA ACTGTTCAAA ATCGGTGTCG GTCCCTCCAG CTCGCATACC
GTCGGCCCGA TGGTCGCGGC GCGGCGCTTC ACCGTCTGGC TCGACGAGCA GGCGCTGCTC
GTCAGGACCG TGCATGTCGA GGCTGATCTC TACGGCTCGC TTGCGCTGAC GGGGAAGGGC
CACGCCGCCG ACACCGCGAT CGTCGCGGGG CTTGCGGGCG AAATCCCCGC CTCGACCAGC
CTCGCCGCGA TCAAGGCGCA TTGGGAGCGC GCGGCCAGCG AGGGTTTCAT CTATCTGCTC
GGTCGTCAGC GCGTTCGCTT CCAGCCGCAA CGCGACCTTC ATTTCCAGAT GAAGCAGCGC
CAGCCGTTCC ACAGCAATGC CGTCAGCTTC ACCGCGCGCG ACGGCGATGG CGAAATCCTG
GCCAAGCGCA TGTATTTCTC GATCGGCGGC GGCTTTGTCG TCGACGAGGA CGAGGCGGGA
CGCAACAGCC GCGGCGCCGA GGATGAGGTG GAACTGCCTT ACGCCTTCAC CTCGGGCGCC
GACCTGCTCG CCATGGGCGC CGTGTCGGGC AAGAGCTTTG CCGAGATGAT GCTCGAAAAT
GAACTGGTGC ATCGCAGCCT GGACGAGGTG AATGCCGGAC TCGACGCCAT CGCCGCCGCG
ATGGACGCCT CGATCGACGC CGGATGTTGC AGCACTGGCA CCTTGCCCGG CGGGCTCAAG
GTCAAGCGCC GCGCGCCGCA GATCGCCGCC GACATCCGCG AACGGCATGA GGCCAATTTG
TCGGACCCGA TGGCGATGAT GGACTGGATC AACCTGTGGG CGATGGCGGT GAATGAGGAA
AATGCCGCGG GCGGCAAGGT CGTCACTGCG CCCACCAACG GCGCGGCGGG GATCATCCCC
GCGGTGATCC GCTACTATAA ACGCAGTTAT CGCGGCGACG CCGCGGGCGT ACGCACTTTC
CTGCTCGCCG CGGGCGCGGT CGGCGCGCTC TATAAACGCA ACGCCAGCAT CTCGGGCGCC
GAGGTCGGCT GTCAGGGTGA GGTCGGCGTC GCCTGCTCGA TGGCGGCGGC GGGGCTGACG
GCGGCCTTGG GCGGCACCAA CGCGCAGGTC GAAAATGCTG CCGAGATCGG CATGGAACAT
AACCTCGGCC TCACCTGCGA TCCCATCGGC GGCCTCGTCC AGATCCCTTG CATCGAGCGC
AACGCGATGG GCGCGATCAA GGCGATCGAC GCCAGCCGCA TCGCGATGAT CGGCGACGGC
ACGCATGTCG TCAGCCTCGA CACGGTGATC GCGACGATGC TGCAAACGGG CCGCGACATG
CGCGACAAAT ATAAGGAAAC GTCGAAGGGC GGGCTGGCGG TCAGCGTGGT GGAGTGTTGA
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| Protein sequence | MTISLFELFK IGVGPSSSHT VGPMVAARRF TVWLDEQALL VRTVHVEADL YGSLALTGKG
HAADTAIVAG LAGEIPASTS LAAIKAHWER AASEGFIYLL GRQRVRFQPQ RDLHFQMKQR
QPFHSNAVSF TARDGDGEIL AKRMYFSIGG GFVVDEDEAG RNSRGAEDEV ELPYAFTSGA
DLLAMGAVSG KSFAEMMLEN ELVHRSLDEV NAGLDAIAAA MDASIDAGCC STGTLPGGLK
VKRRAPQIAA DIRERHEANL SDPMAMMDWI NLWAMAVNEE NAAGGKVVTA PTNGAAGIIP
AVIRYYKRSY RGDAAGVRTF LLAAGAVGAL YKRNASISGA EVGCQGEVGV ACSMAAAGLT
AALGGTNAQV ENAAEIGMEH NLGLTCDPIG GLVQIPCIER NAMGAIKAID ASRIAMIGDG
THVVSLDTVI ATMLQTGRDM RDKYKETSKG GLAVSVVEC
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