| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0270 |
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| Symbol | |
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| ID | 4081218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 269295 |
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| End bp | 270797 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638008628 |
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| Product | peptidase S10, serine carboxypeptidase |
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| Protein accession | YP_615326 |
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| Protein GI | 103485765 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.130085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGG GTCTGTCGCT GATCGCGCTG GCGCTTGCCG TCGCGGTTCC TGCCATCGTC
CATGCCGAGG ACAAGAATGA CAAGGCGAAG GCCGAAAAGC CCGCCGACTA CGAACCGCAA
ATCCGCACCA CCAAACTCAG CGGCACCTTT GGCGGCCAGC GGATCAATTA CGCCGCGACG
ATTGGTGAGA CGATCATCAG GAACAAGGAC GGCGTGCCCG AAGTCGCCGT CGTCACCACA
TCCTATGTCA AGGAACCGCG CGACACCAGC CGTCCGGTGA CCTTCCTGTT CAACGGCGGC
CCCGGTTCGG GCACCGTCTG GTTGATGATG GGCGCGTTCG GGCCGAAGCG CGTTGCGATC
CCCGGCACCG GGGTTGATGA CGGCGCGCCG CCCTGGCCCA TCGTCGACAA TCCCGACGCG
CTGCTCGACG TCACCGACAT CGTGTTCATC GACCCGCCGG GCACGGGCTT TTCGCACCTG
ATCGGCAAGG CCGACCCCAA GGATTATTAC GGCGTGACGC AGGATGCGAA GCTGGTCGCC
GAAGTGATCC GCCGCTGGCT CGCCGACAAT GGCCGCTGGA ACAGCCCCAA ATATCTCGGC
GGCGAAAGCT ATGGCACCAC CCGCACCGCC GCGGTCGCGC ACCAGCTGAT GAACGCGACT
TACAATGATG TCGCGTTCAA CGGGCTGATC CTGATTTCGA CCGTGCTCGA TTTTGCGGCG
GGCGCCGACA CGCCGGGCAA CGAGCTGTCG CCGGTCACCA ACCTGCCGTC GATGGCGGTC
ACCGCGCTCT ATCACGGCAA GGCGAGCGCG TCGTCGGTCG AGGCTTTTGC AGAGGAAGCG
CGGCAATGGG CGATCGGCCC CTATGCGACC GCGCTGCTCA AAGGGCAGAA ATTGCAGGGC
GAGGAGCGCG CCGCGATCCG CCGCGAGCTT GCGCGCTTCA CCGGCCTGTC CGAAACCTGG
CTCGAACAGG CGGACCTGCG CGTCACGCCC GCGCGCTTCT ACAAGGAGCT GCTGCGCGAC
CGCGGCCTCA CCGTCGGGCG CCTCGACAGC CGCTATACGG GCAAGGATTA TGACCACGCC
GGCGAAACCC CCGACAACGA TCCCAGCTTT TACGGGATCG ACGCCAGCTA TACCGCGGCG
ATCAACAGCT GGCTGCGCGA CGGATTGGGG TTCAGGACGG ACCGCGAATA TCAGTCGATC
AGCGGCATCG GCGGGCAATG GGACTGGCGC ATCGGCGGGC GCGACACCAA CGCCTATCTG
AACGTCGCGC CGTACATCGG ACAGGCGATG CGCGAGAACA GCGGGTTGCG CGTGCTCGTC
GCGCAGGGCT GGTATGATTT CGCAACGCCC TTTTTCGCCG CCGAATATGC GCTGTCACGC
ACCGGCATCC CGCAGGATCG CATCACCTTT ACCTATTATG ACGCAGGCCA CATGATGTAC
ATCCGCGACG AAGACCGGCG GAAACTGTCG GAGGATGTGC GGGCGTTTAT CCGGGCGCGG
TAG
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| Protein sequence | MKSGLSLIAL ALAVAVPAIV HAEDKNDKAK AEKPADYEPQ IRTTKLSGTF GGQRINYAAT
IGETIIRNKD GVPEVAVVTT SYVKEPRDTS RPVTFLFNGG PGSGTVWLMM GAFGPKRVAI
PGTGVDDGAP PWPIVDNPDA LLDVTDIVFI DPPGTGFSHL IGKADPKDYY GVTQDAKLVA
EVIRRWLADN GRWNSPKYLG GESYGTTRTA AVAHQLMNAT YNDVAFNGLI LISTVLDFAA
GADTPGNELS PVTNLPSMAV TALYHGKASA SSVEAFAEEA RQWAIGPYAT ALLKGQKLQG
EERAAIRREL ARFTGLSETW LEQADLRVTP ARFYKELLRD RGLTVGRLDS RYTGKDYDHA
GETPDNDPSF YGIDASYTAA INSWLRDGLG FRTDREYQSI SGIGGQWDWR IGGRDTNAYL
NVAPYIGQAM RENSGLRVLV AQGWYDFATP FFAAEYALSR TGIPQDRITF TYYDAGHMMY
IRDEDRRKLS EDVRAFIRAR
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