| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0264 |
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| Symbol | |
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| ID | 4081212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 264693 |
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| End bp | 265829 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638008622 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_615320 |
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| Protein GI | 103485759 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.241284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.379489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGCGCG GACTCGGCGC GGTGGCGCTG GCGGGGGTGC TTGCCGCGTG CCAGGTCGTG
CCCAGGACCG GCGGACCTGC AACGCCGCCG CCACCGAGCG ATCCGGGCGA AACCGTCGGC
CCCGGCCTGC CCACCGACAC CGACCGCCAC CGCGTTGCGC TGCTCGTGCC GCAGACGGGC
CCCAACGCCG ATGTCGGCAC CGCGATCGCC AATGCGACGA CGATGGCGCT GCTCGACACG
CGCACCGAAC GGCTGCGCAT CACCACCTAT GACACCGCGC TGGGTGCCGC AGCGGCGGCG
CGGCAGGCGG TCGCCGACGG CAACAAGCTG ATCCTGGGGC CGTTGCTCAG CGAAGATGTC
GCCGCGGTCG CGCCGATCGC GCGCGGCGCG AAAATCCCGG TGCTGAGTTT TTCGAACGAC
AGCAGCGTCG CGGGCAATGG CGTCTTCATC ATGGGCTTCG TCCCCGGCCA GTCGGTCGAA
CGGATCGTCG CCTTTTCGCG CGCGAAGGGA CATCAGCGGT TCGGCGCGCT GGTACCCAAG
AATGTCTATG GCGACCGTTC GGCAGCGGCG TTCCGCGCCG CGGTGGCCGA GGCGGGCGGA
ACGCTCGTCG CGCTCGAAAG CTATGACCGC AGCGCGACCG CGCTGACCGG CGCGGCGCGG
CGGGTCGCGA ACGCGGGCGA TATTGACGCG GTGCTGATCG CCGACAGCGG CGGCAACGCC
ATTCGCGCGG TTCCGGTCAT AAAATCGGCG GGCGATCGCC AGATCCTCGG TACCGAGCTG
TGGAACACCG ACGCGGTGCT GGCGGGCAGC GCGGCGATGC GCGGGGCGTG GTTCGCGAGC
GTTTCGGACG GGCTGTATGG CCAGCTCGCG ACCAAATATC GCACGCGCTT CGGCCGCGCG
CCGTACCGGC TCGCGAGCCT GGGCTATGAC TCGGTGCTGC TGACCGTGCG GATCGCGCGC
GACTGGAAAC CCGGTACCAA TTTTCCGGTG AACCGGCTGC TCGCGACTGA CGGCTTTGGC
GGCATCGACG GCATTTTCCG CTTCAACAAC CGGGGCATTG CCGAGCGCGC GCTCGAGGTG
AGCGAAATCG GCGCCGGCGG CTTTCGCGTC ATCGACCCCG CGCCGACCAA ATGGTGA
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| Protein sequence | MLRGLGAVAL AGVLAACQVV PRTGGPATPP PPSDPGETVG PGLPTDTDRH RVALLVPQTG
PNADVGTAIA NATTMALLDT RTERLRITTY DTALGAAAAA RQAVADGNKL ILGPLLSEDV
AAVAPIARGA KIPVLSFSND SSVAGNGVFI MGFVPGQSVE RIVAFSRAKG HQRFGALVPK
NVYGDRSAAA FRAAVAEAGG TLVALESYDR SATALTGAAR RVANAGDIDA VLIADSGGNA
IRAVPVIKSA GDRQILGTEL WNTDAVLAGS AAMRGAWFAS VSDGLYGQLA TKYRTRFGRA
PYRLASLGYD SVLLTVRIAR DWKPGTNFPV NRLLATDGFG GIDGIFRFNN RGIAERALEV
SEIGAGGFRV IDPAPTKW
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